SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1b0b'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_C_FUAC701_2
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
1b0b HEMOGLOBIN
(Phacoides
pectinatus)
5 / 12 PHE A  92
PHE A  29
LEU A  32
VAL A 112
VAL A  39
HEM  A 144 (-4.4A)
CYN  A 145 (-4.4A)
None
None
HEM  A 144 ( 3.6A)
1.15A 1q23C-1b0bA:
undetectable
1q23C-1b0bA:
23.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_L_FUAL710_2
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
1b0b HEMOGLOBIN
(Phacoides
pectinatus)
5 / 11 PHE A  92
PHE A  29
LEU A  32
VAL A 112
VAL A  39
HEM  A 144 (-4.4A)
CYN  A 145 (-4.4A)
None
None
HEM  A 144 ( 3.6A)
1.20A 1q23L-1b0bA:
undetectable
1q23L-1b0bA:
23.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B2R_A_VDNA1_1
(CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE)
1b0b HEMOGLOBIN
(Phacoides
pectinatus)
5 / 12 ALA A 108
VAL A  39
PHE A  43
MET A  30
PHE A  28
None
HEM  A 144 ( 3.6A)
HEM  A 144 ( 3.8A)
None
None
1.09A 3b2rA-1b0bA:
undetectable
3b2rA-1b0bA:
19.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FGC_A_ACTA810_0
(GEPHYRIN)
1b0b HEMOGLOBIN
(Phacoides
pectinatus)
3 / 3 LEU A  46
SER A  44
PHE A  43
HEM  A 144 ( 3.9A)
None
HEM  A 144 ( 3.8A)
0.60A 6fgcA-1b0bA:
undetectable
6fgcA-1b0bA:
16.43