SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1byo'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OE1_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.46A 1oe1A-1byoA:
4.1		 1oe1A-1byoA:
15.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OE2_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		5 / 5 HIS A  37
CYH A  84
PRO A  86
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
None
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.84A 1oe2A-1byoA:
6.8		 1oe2A-1byoA:
15.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OE3_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.50A 1oe3A-1byoA:
4.1		 1oe3A-1byoA:
15.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQD_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.43A 2fqdA-1byoA:
3.7		 2fqdA-1byoA:
12.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQE_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.40A 2fqeA-1byoA:
3.4		 2fqeA-1byoA:
12.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQF_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.38A 2fqfA-1byoA:
3.4		 2fqfA-1byoA:
12.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQG_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.38A 2fqgA-1byoA:
3.6		 2fqgA-1byoA:
12.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XXG_A_CUA1337_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.48A 2xxgA-1byoA:
5.6		 2xxgA-1byoA:
15.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XXG_C_CUC1338_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		5 / 5 HIS A  37
CYH A  84
PRO A  86
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
None
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.89A 2xxgC-1byoA:
6.7		 2xxgC-1byoA:
15.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZUL_A_SAMA376_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		5 / 12 GLY A  94
LEU A  19
ASP A  42
VAL A  46
VAL A  52
 None
 1.00A 2zulA-1byoA:
undetectable		 2zulA-1byoA:
14.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DMH_A_SAMA384_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		5 / 12 GLY A  94
LEU A  19
ASP A  42
VAL A  46
VAL A  52
 None
 1.03A 3dmhA-1byoA:
undetectable		 3dmhA-1byoA:
14.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPD_C_SAMC1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		3 / 3 ASN A  38
ASN A  64
GLU A  68
 None
 0.88A 3kpdB-1byoA:
0.0		 3kpdB-1byoA:
22.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EF3_A_CUA1001_0
(BLUE COPPER OXIDASE
CUEO)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		4 / 4 HIS A  37
CYH A  84
HIS A  87
MET A  92
 CU  A 100 ( 3.1A)
CU  A 100 ( 2.1A)
CU  A 100 ( 3.1A)
CU  A 100 ( 2.7A)
 0.34A 4ef3A-1byoA:
3.3		 4ef3A-1byoA:
12.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OGR_E_ADNE401_1
(CYCLIN-DEPENDENT
KINASE 9)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		5 / 7 GLY A  94
ALA A  88
ASP A  39
LEU A  40
ASP A  42
 None
 1.48A 4ogrE-1byoA:
undetectable		 4ogrE-1byoA:
14.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWZ_D_010D6_0
(N-[(5-METHYLISOXAZOL
-3-YL)CARBONYL]ALANY
L-L-VALYL-N~1~-((1R,
2Z)-4-(BENZYLOXY)-4-
OXO-1-{[(3R)-2-OXOPY
RROLIDIN-3-YL]METHYL
}BUT-2-ENYL)-L-LEUCI
NAMIDE
PEDV MAIN PROTEASE)		 1byo PROTEIN
(PLASTOCYANIN)
(Silene
latifolia) 		3 / 3 MET A  92
HIS A  37
GLY A  11
 CU  A 100 ( 2.7A)
CU  A 100 ( 3.1A)
None
 0.69A 5gwzB-1byoA:
undetectable		 5gwzB-1byoA:
17.33