SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ck7'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BRP_A_RTLA183_0
(RETINOL BINDING
PROTEIN)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 ALA A 408
MET A 409
MET A 421
LEU A 157
HIS A 403
None
None
None
None
ZN  A 990 ( 3.4A)
1.43A 1brpA-1ck7A:
0.3
1brpA-1ck7A:
14.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DG5_A_TOPA201_1
(DIHYDROFOLATE
REDUCTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 11 ILE A 473
ALA A 635
PHE A 475
PRO A 499
ILE A 468
None
1.12A 1dg5A-1ck7A:
undetectable
1dg5A-1ck7A:
12.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OS2_A_HAEA874_1
(MACROPHAGE
METALLOELASTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.41A 1os2A-1ck7A:
28.0
1os2A-1ck7A:
18.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TMX_B_BEZB882_0
(HYDROXYQUINOL
1,2-DIOXYGENASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 GLY A 179
HIS A 193
HIS A 178
HIS A 206
VAL A 201
None
ZN  A 991 ( 3.1A)
ZN  A 991 ( 3.1A)
ZN  A 991 ( 3.1A)
None
1.09A 1tmxB-1ck7A:
undetectable
1tmxB-1ck7A:
18.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Y93_A_HAEA301_1
(MACROPHAGE
METALLOELASTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 6 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.43A 1y93A-1ck7A:
27.8
1y93A-1ck7A:
26.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O7O_A_DXTA222_1
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 SER A 246
HIS A 276
PRO A 275
VAL A 221
GLN A 219
None
1.34A 2o7oA-1ck7A:
0.1
2o7oA-1ck7A:
15.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OW9_A_HAEA502_1
(COLLAGENASE 3)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 6 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.43A 2ow9A-1ck7A:
27.6
2ow9A-1ck7A:
22.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OZR_F_HAEF3004_1
(COLLAGENASE 3)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
3 / 3 HIS A 403
HIS A 407
HIS A 413
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.24A 2ozrF-1ck7A:
27.4
2ozrF-1ck7A:
22.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XZ5_C_ACHC1211_0
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 8 THR A 339
SER A 344
TYR A 381
TRP A 374
None
1.33A 2xz5A-1ck7A:
0.0
2xz5C-1ck7A:
0.0
2xz5A-1ck7A:
15.12
2xz5C-1ck7A:
15.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A25_A_SAMA279_0
(UNCHARACTERIZED
PROTEIN PH0793)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 PHE A 297
GLY A 318
LYS A 327
ASP A 326
THR A 320
None
1.26A 3a25A-1ck7A:
undetectable
3a25A-1ck7A:
18.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BSZ_F_RTLF178_0
(PLASMA
RETINOL-BINDING
PROTEIN)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 11 LEU A 420
ALA A 404
PHE A 207
ALA A 192
TYR A 425
None
1.31A 3bszF-1ck7A:
0.2
3bszF-1ck7A:
14.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZH_A_D2VA602_1
(CYTOCHROME P450 2R1)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 THR A 580
PHE A 535
ALA A 479
ALA A 570
VAL A 568
None
None
NA  A 996 (-3.0A)
CL  A 995 ( 4.9A)
None
1.14A 3czhA-1ck7A:
undetectable
3czhA-1ck7A:
20.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZH_B_D2VB602_1
(CYTOCHROME P450 2R1)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 THR A 580
PHE A 535
ALA A 479
ALA A 570
VAL A 568
None
None
NA  A 996 (-3.0A)
CL  A 995 ( 4.9A)
None
1.12A 3czhB-1ck7A:
undetectable
3czhB-1ck7A:
20.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HY7_B_097B801_1
(A DISINTEGRIN AND
METALLOPROTEINASE
WITH THROMBOSPONDIN
MOTIFS 5)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 9 LEU A 191
HIS A 403
HIS A 407
HIS A 413
ILE A 424
None
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
None
0.54A 3hy7B-1ck7A:
10.2
3hy7B-1ck7A:
16.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LIK_A_HAEA302_1
(MACROPHAGE
METALLOELASTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.45A 3likA-1ck7A:
27.8
3likA-1ck7A:
26.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LKA_A_HAEA269_1
(MACROPHAGE
METALLOELASTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.46A 3lkaA-1ck7A:
27.7
3lkaA-1ck7A:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8Y_B_SALB900_1
(PROSTAGLANDIN G/H
SYNTHASE 1)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 VAL A 648
LEU A 640
ILE A 613
ALA A 612
None
0.97A 3n8yB-1ck7A:
0.4
3n8yB-1ck7A:
20.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A7B_A_HAEA1273_1
(COLLAGENASE 3)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 6 HIS A 193
HIS A 403
HIS A 407
HIS A 413
ZN  A 991 ( 3.1A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
ZN  A 990 ( 3.4A)
0.40A 4a7bA-1ck7A:
27.6
4a7bA-1ck7A:
23.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C9L_A_CAMA1419_0
(CYTOCHROME P450)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 THR A  93
LEU A  70
LEU A  74
GLY A  87
ILE A  94
None
1.04A 4c9lA-1ck7A:
undetectable
4c9lA-1ck7A:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C9O_A_CAMA423_0
(CYTOCHROME P450)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 THR A  93
LEU A  70
LEU A  74
GLY A  87
ILE A  94
None
1.03A 4c9oA-1ck7A:
undetectable
4c9oA-1ck7A:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G8Z_X_TOPX301_1
(DIHYDROFOLATE
REDUCTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 10 ILE A 473
ALA A 635
PHE A 475
PRO A 499
ILE A 468
None
1.03A 4g8zX-1ck7A:
undetectable
4g8zX-1ck7A:
14.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LVC_B_ADNB501_2
(S-ADENOSYL-L-HOMOCYS
TEINE HYDROLASE
(SAHASE))
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 GLN A 442
THR A 155
LEU A 420
LEU A 433
None
1.01A 4lvcB-1ck7A:
undetectable
4lvcB-1ck7A:
22.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M2X_A_TMQA202_1
(DIHYDROFOLATE
REDUCTASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 12 ILE A 169
ALA A 194
PHE A 405
LEU A 397
ILE A 171
None
0.96A 4m2xA-1ck7A:
undetectable
4m2xA-1ck7A:
13.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OU1_A_BEZA302_0
(RETRO-ALDOLASE,
DESIGN RA114)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 8 TYR A 126
ILE A 128
ILE A 171
ALA A 401
None
0.99A 4ou1A-1ck7A:
undetectable
4ou1A-1ck7A:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XP6_A_B40A601_1
(TRANSPORTER)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 ASP A 564
VAL A 568
ASP A 569
GLY A 585
None
1.18A 4xp6A-1ck7A:
0.0
4xp6A-1ck7A:
21.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E4D_A_BEZA201_0
(HYDROXYNITRILE LYASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 9 TYR A 581
ILE A 613
PHE A 631
TRP A 574
LEU A 640
None
1.44A 5e4dA-1ck7A:
undetectable
5e4dA-1ck7A:
15.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWK_F_EVPF102_1
(DNA TOPOISOMERASE
2-ALPHA)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 5 GLY A 255
ASP A 254
ARG A 252
MET A 282
None
1.47A 5gwkA-1ck7A:
0.0
5gwkA-1ck7A:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HES_A_032A401_2
(MITOGEN-ACTIVATED
PROTEIN KINASE
KINASE KINASE MLT)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 6 PHE A 389
PHE A 184
VAL A  41
ASP A 188
None
1.12A 5hesA-1ck7A:
undetectable
5hesA-1ck7A:
18.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KR2_A_ROCA101_1
(PROTEASE PR5-SQV)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 9 ASP A 436
ASP A 437
ILE A 438
THR A 155
PRO A 156
None
1.19A 5kr2A-1ck7A:
undetectable
5kr2A-1ck7A:
8.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KR2_C_ROCC101_1
(PROTEASE PR5-SQV)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
5 / 9 ASP A 436
ASP A 437
ILE A 438
THR A 155
PRO A 156
None
1.31A 5kr2C-1ck7A:
undetectable
5kr2C-1ck7A:
8.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M5K_B_ADNB502_2
(ADENOSYLHOMOCYSTEINA
SE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 4 GLN A 442
THR A 155
LEU A 420
LEU A 433
None
1.01A 5m5kB-1ck7A:
undetectable
5m5kB-1ck7A:
22.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VLM_A_CVIA301_1
(REGULATORY PROTEIN
TETR)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 8 GLY A  59
GLN A 415
VAL A 107
ASP A 106
None
1.00A 5vlmA-1ck7A:
undetectable
5vlmA-1ck7A:
15.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZRD_A_CUA606_0
(TYROSINASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 4 HIS A 403
CYH A 102
HIS A 413
HIS A 407
ZN  A 990 ( 3.4A)
ZN  A 990 ( 2.5A)
ZN  A 990 ( 3.4A)
ZN  A 990 ( 3.3A)
1.50A 5zrdA-1ck7A:
undetectable
5zrdA-1ck7A:
23.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C2M_D_SUED1202_1
(NS3 PROTEASE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
4 / 9 PHE A 207
VAL A 400
HIS A 403
LEU A 212
None
None
ZN  A 990 ( 3.4A)
None
0.96A 6c2mD-1ck7A:
0.3
6c2mD-1ck7A:
7.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6ESM_A_PZEA307_1
(MATRIX
METALLOPROTEINASE-9,
MATRIX
METALLOPROTEINASE-9)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
3 / 3 TYR A 182
HIS A 193
PHE A 195
None
ZN  A 991 ( 3.1A)
None
0.28A 6esmA-1ck7A:
28.0
6esmA-1ck7A:
33.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EXI_C_ADNC502_1
(ADENOSYLHOMOCYSTEINA
SE)
1ck7 PROTEIN (GELATINASE
A)

(Homo
sapiens)
3 / 3 LEU A  83
GLY A 505
PHE A 512
None
0.66A 6exiC-1ck7A:
undetectable
6exiC-1ck7A:
8.73