SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1cuk'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NMU_J_SAMJ228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)		 1cuk RUVA PROTEIN
(Escherichia
coli) 		5 / 11 GLU A  68
ALA A  95
ILE A  89
PHE A  72
ALA A  88
 None
 1.20A 3nmuB-1cukA:
undetectable
3nmuJ-1cukA:
undetectable		 3nmuB-1cukA:
23.06
3nmuJ-1cukA:
22.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S56_B_ROCB203_1
(PROTEASE)		 1cuk RUVA PROTEIN
(Escherichia
coli) 		4 / 7 LEU A 124
LEU A 110
PRO A 114
ILE A 116
 None
 0.95A 3s56B-1cukA:
undetectable		 3s56B-1cukA:
18.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J7X_A_SASA806_1
(SEPIAPTERIN
REDUCTASE)		 1cuk RUVA PROTEIN
(Escherichia
coli) 		5 / 12 LEU A 124
PHE A  98
ALA A 109
MET A  93
GLY A  92
 None
 1.38A 4j7xA-1cukA:
undetectable		 4j7xA-1cukA:
21.40