SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1d9n'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JLF_A_NVPA999_1
(HIV-1 RT A-CHAIN
HIV-1 RT B-CHAIN)		 1d9n METHYL-CPG-BINDING
PROTEIN MBD1
(Homo
sapiens) 		4 / 8 LEU A  53
TYR A  35
CYH A   8
GLY A  14
 None
 1.05A 1jlfA-1d9nA:
undetectable
1jlfB-1d9nA:
undetectable		 1jlfA-1d9nA:
9.63
1jlfB-1d9nA:
11.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W8Y_A_486A1000_1
(PROGESTERONE
RECEPTOR)		 1d9n METHYL-CPG-BINDING
PROTEIN MBD1
(Homo
sapiens) 		5 / 12 LEU A  49
GLY A  14
PHE A  62
LEU A  69
CYH A  57
 None
 1.30A 2w8yA-1d9nA:
undetectable		 2w8yA-1d9nA:
16.34