SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1di0'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AXT_A_SAMA397_0
(PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1)
1di0 LUMAZINE SYNTHASE
(Brucella
abortus)
5 / 12 ALA A  78
ARG A  31
SER A 113
ALA A 140
PHE A 132
None
1.16A 3axtA-1di0A:
undetectable
3axtA-1di0A:
18.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LL3_A_017A201_1
(PROTEASE)
1di0 LUMAZINE SYNTHASE
(Brucella
abortus)
5 / 8 ALA A 143
VAL A  76
GLY A 136
VAL A  48
ILE A  15
None
1.45A 4ll3A-1di0A:
0.0
4ll3A-1di0A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MZR_E_PFLE409_1
(PROTON-GATED ION
CHANNEL)
1di0 LUMAZINE SYNTHASE
(Brucella
abortus)
4 / 8 PRO A  60
ILE A  97
VAL A 115
TYR A  57
None
0.86A 5mzrE-1di0A:
2.6
5mzrE-1di0A:
18.40