SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1doq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1U18_A_HSMA401_1
(NITROPHORIN 1)		 1doq RNA POLYMERASE ALPHA
SUBUNIT
(Thermus
thermophilus) 		4 / 4 ASP A 287
LEU A 281
LEU A 313
LEU A 283
 None
 1.33A 1u18A-1doqA:
undetectable		 1u18A-1doqA:
17.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LOQ_A_ACTA278_0
(UNIVERSAL STRESS
PROTEIN)		 1doq RNA POLYMERASE ALPHA
SUBUNIT
(Thermus
thermophilus) 		3 / 3 SER A 298
GLY A 295
SER A 268
 None
 0.68A 3loqA-1doqA:
undetectable		 3loqA-1doqA:
14.34