SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1fbn'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 LYS A  58
GLY A  82
ALA A  83
ALA A 131
ASP A 150
None
0.80A 1nt2A-1fbnA:
30.7
1nt2A-1fbnA:
47.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 LYS A  58
TYR A  80
ALA A 131
ASP A 150
GLN A 153
None
0.65A 1nt2A-1fbnA:
30.7
1nt2A-1fbnA:
47.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 LYS A  58
TYR A  80
GLY A  82
ALA A 131
ASP A 150
None
0.55A 1nt2A-1fbnA:
30.7
1nt2A-1fbnA:
47.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 TYR A  80
GLY A  82
THR A  88
ALA A 131
ASP A 150
None
0.69A 1nt2A-1fbnA:
30.7
1nt2A-1fbnA:
47.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 TYR A  80
THR A  88
ALA A 131
ASP A 150
GLN A 153
None
0.62A 1nt2A-1fbnA:
30.7
1nt2A-1fbnA:
47.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B25_B_SAMB602_1
(HYPOTHETICAL PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
3 / 3 GLY A  82
GLU A 105
ASP A 150
None
0.70A 2b25B-1fbnA:
14.1
2b25B-1fbnA:
23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DTU_C_DXCC576_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 2)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 8 PRO A  89
ALA A  93
ALA A  96
ILE A 124
None
0.55A 3dtuC-1fbnA:
undetectable
3dtuD-1fbnA:
0.0
3dtuC-1fbnA:
16.64
3dtuD-1fbnA:
21.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
7 / 11 LYS A  58
GLY A  82
THR A  88
GLU A 105
ASP A 130
ALA A 131
ASP A 150
None
0.94A 3id5B-1fbnA:
30.3
3id5B-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 11 LYS A  58
THR A  88
GLU A 105
ALA A 131
ASP A 150
GLN A 153
None
1.02A 3id5B-1fbnA:
30.3
3id5B-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
7 / 11 LYS A  58
TYR A  80
GLY A  82
THR A  88
ASP A 130
ALA A 131
ASP A 150
None
0.96A 3id5B-1fbnA:
30.3
3id5B-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 11 LYS A  58
TYR A  80
THR A  88
ALA A 131
ASP A 150
GLN A 153
None
1.07A 3id5B-1fbnA:
30.3
3id5B-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_F_SAMF301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
7 / 11 LYS A  58
GLY A  82
THR A  88
GLU A 105
ASP A 130
ALA A 131
ASP A 150
None
0.94A 3id5F-1fbnA:
30.3
3id5F-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_F_SAMF301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 11 LYS A  58
THR A  88
GLU A 105
ALA A 131
ASP A 150
GLN A 153
None
1.02A 3id5F-1fbnA:
30.3
3id5F-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_F_SAMF301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
7 / 11 LYS A  58
TYR A  80
GLY A  82
THR A  88
ASP A 130
ALA A 131
ASP A 150
None
0.96A 3id5F-1fbnA:
30.3
3id5F-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID5_F_SAMF301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 11 LYS A  58
TYR A  80
THR A  88
ALA A 131
ASP A 150
GLN A 153
None
1.07A 3id5F-1fbnA:
30.3
3id5F-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID6_C_SAMC301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 GLY A  82
THR A  88
GLU A 105
ASP A 130
ALA A 131
ASP A 150
None
0.80A 3id6C-1fbnA:
31.7
3id6C-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID6_C_SAMC301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 THR A  88
GLU A 105
ASP A 130
ALA A 131
ASP A 150
GLN A 153
None
0.94A 3id6C-1fbnA:
31.7
3id6C-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID6_C_SAMC301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 TYR A  80
GLY A  82
ALA A  83
ALA A 131
ASP A 150
None
1.08A 3id6C-1fbnA:
31.7
3id6C-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID6_C_SAMC301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 TYR A  80
GLY A  82
THR A  88
ASP A 130
ALA A 131
ASP A 150
None
0.68A 3id6C-1fbnA:
31.7
3id6C-1fbnA:
49.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ID6_C_SAMC301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 TYR A  80
THR A  88
ASP A 130
ALA A 131
ASP A 150
GLN A 153
None
0.83A 3id6C-1fbnA:
31.7
3id6C-1fbnA:
49.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MB5_A_SAMA301_1
(SAM-DEPENDENT
METHYLTRANSFERASE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 4 GLY A  82
GLU A 105
ASP A 130
ASP A 150
None
0.92A 3mb5A-1fbnA:
17.5
3mb5A-1fbnA:
25.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NMU_F_SAMF228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
ASP A 130
ALA A 131
ASP A 150
GLN A 153
None
0.81A 3nmuA-1fbnA:
0.4
3nmuF-1fbnA:
34.7
3nmuA-1fbnA:
22.74
3nmuF-1fbnA:
53.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NMU_F_SAMF228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
GLU A 105
ASP A 130
ALA A 131
ASP A 150
None
0.94A 3nmuA-1fbnA:
0.4
3nmuF-1fbnA:
34.7
3nmuA-1fbnA:
22.74
3nmuF-1fbnA:
53.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3NVK_I_SAMI228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
ALA A  83
ILE A 104
ASP A 130
ASP A 150
GLU A 217
None
1.34A 3nvkI-1fbnA:
34.0
3nvkI-1fbnA:
53.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3NVK_I_SAMI228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
9 / 12 LYS A  58
GLY A  82
ILE A 104
ASP A 130
ALA A 131
ASP A 150
VAL A 151
GLN A 153
GLU A 217
None
0.87A 3nvkI-1fbnA:
34.0
3nvkI-1fbnA:
53.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3NVK_I_SAMI228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 THR A  88
ILE A 104
ALA A 131
ASP A 150
GLU A 217
None
0.85A 3nvkI-1fbnA:
34.0
3nvkI-1fbnA:
53.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NVK_J_SAMJ228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 GLY A  82
ASP A 130
ALA A 131
ASP A 150
VAL A 151
GLN A 153
None
0.77A 3nvkF-1fbnA:
0.0
3nvkJ-1fbnA:
33.9
3nvkF-1fbnA:
22.40
3nvkJ-1fbnA:
53.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NVK_J_SAMJ228_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE
NOP5/NOP56 RELATED
PROTEIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 GLY A  82
GLU A 105
ASP A 130
ALA A 131
ASP A 150
None
1.11A 3nvkF-1fbnA:
0.0
3nvkJ-1fbnA:
33.9
3nvkF-1fbnA:
22.40
3nvkJ-1fbnA:
53.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3O1C_A_ADNA127_1
(HISTIDINE TRIAD
NUCLEOTIDE-BINDING
PROTEIN 1)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 10 ILE A 124
ASP A  94
ILE A  30
SER A  29
HIS A  91
None
1.19A 3o1cA-1fbnA:
undetectable
3o1cA-1fbnA:
21.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3T3S_F_9PLF1_1
(CYTOCHROME P450 2A13)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 8 ALA A  62
PHE A 193
PHE A 223
ALA A 177
None
0.90A 3t3sF-1fbnA:
0.0
3t3sF-1fbnA:
19.49
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF3_A_SAMA301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
ALA A 107
ASP A 130
ALA A 131
ASP A 150
None
0.67A 4df3A-1fbnA:
31.8
4df3A-1fbnA:
48.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF3_A_SAMA301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
THR A  87
ALA A 131
ASP A 150
VAL A 151
None
0.68A 4df3A-1fbnA:
31.8
4df3A-1fbnA:
48.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF3_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 LYS A  58
ALA A  83
ALA A 107
ASP A 130
ALA A 131
None
1.35A 4df3B-1fbnA:
31.4
4df3B-1fbnA:
48.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF3_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
ALA A 107
ASP A 130
ALA A 131
ASP A 150
None
0.72A 4df3B-1fbnA:
31.4
4df3B-1fbnA:
48.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4DF3_B_SAMB301_0
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
6 / 12 LYS A  58
GLY A  82
THR A  87
ALA A 131
ASP A 150
VAL A 151
None
0.70A 4df3B-1fbnA:
31.4
4df3B-1fbnA:
48.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PWD_A_NVPA901_1
(HIV-1 REVERSE
TRANSCRIPTASE, P66
SUBUNIT)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 8 VAL A 101
VAL A 146
TYR A 148
TYR A  80
None
0.87A 4pwdA-1fbnA:
0.0
4pwdA-1fbnA:
19.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1K_D_LOCD502_1
(TUBULIN ALPHA CHAIN
TUBULIN BETA CHAIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 4 ASN A 123
SER A  29
ALA A  93
VAL A  92
None
1.24A 4x1kC-1fbnA:
3.4
4x1kC-1fbnA:
18.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_A_SAMA301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
5 / 12 ASP A 130
ALA A 131
ASP A 150
THR A  88
GLU A 105
None
1.09A 5hfjA-1fbnA:
3.0
5hfjA-1fbnA:
23.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NM5_B_LOCB502_1
(TUBULIN ALPHA-1B
CHAIN
TUBULIN BETA-2B
CHAIN)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 4 ASN A 123
SER A  29
ALA A  93
VAL A  92
None
1.20A 5nm5A-1fbnA:
4.3
5nm5A-1fbnA:
18.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NOO_D_D16D402_1
(THYMIDYLATE SYNTHASE)
1fbn MJ FIBRILLARIN
HOMOLOGUE

(Methanocaldococc
us
jannaschii)
4 / 8 TYR A 102
ILE A 140
ASP A 130
GLY A 129
None
0.91A 5nooD-1fbnA:
0.0
5nooD-1fbnA:
21.32