SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1fml'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CBR_A_REAA200_1
(CELLULAR RETINOIC
ACID BINDING PROTEIN
TYPE I)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
5 / 12 PHE A 213
LEU A 200
ALA A 198
THR A 225
THR A 223
None
1.15A 1cbrA-1fmlA:
undetectable
1cbrA-1fmlA:
15.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CBR_B_REAB200_1
(CELLULAR RETINOIC
ACID BINDING PROTEIN
TYPE I)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
5 / 12 PHE A 213
LEU A 200
ALA A 198
THR A 225
THR A 223
None
1.15A 1cbrB-1fmlA:
undetectable
1cbrB-1fmlA:
15.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_A_FFOA1293_2
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 SER A 271
GLU A 272
GLU A 273
None
0.46A 1eqbD-1fmlA:
0.0
1eqbD-1fmlA:
20.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_C_FFOC3293_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 SER A 271
GLU A 272
GLU A 273
None
0.46A 1eqbB-1fmlA:
0.0
1eqbB-1fmlA:
20.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FMJ_A_RTLA401_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
6 / 11 LEU A 139
SER A 142
LYS A 162
MET A 295
ILE A 301
PHE A 310
None
RTL  A 401 (-3.2A)
RTL  A 401 (-2.6A)
RTL  A 401 ( 4.0A)
None
RTL  A 401 (-4.3A)
1.48A 1fmjA-1fmlA:
56.6
1fmjA-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FMJ_A_RTLA401_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
11 / 11 TYR A 105
TYR A 112
TYR A 120
LEU A 139
SER A 142
LYS A 162
HIS A 164
HIS A 197
MET A 295
ILE A 303
PHE A 310
RTL  A 401 (-4.6A)
RTL  A 401 ( 4.8A)
RTL  A 401 ( 4.5A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-2.6A)
RTL  A 401 (-4.4A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.0A)
RTL  A 401 ( 4.0A)
RTL  A 401 (-4.3A)
0.25A 1fmjA-1fmlA:
56.6
1fmjA-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FMJ_B_RTLB501_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
10 / 10 TYR A 105
TYR A 112
TYR A 120
LEU A 139
SER A 142
LYS A 162
HIS A 164
HIS A 197
MET A 295
ILE A 303
RTL  A 401 (-4.6A)
RTL  A 401 ( 4.8A)
RTL  A 401 ( 4.5A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-2.6A)
RTL  A 401 (-4.4A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.0A)
RTL  A 401 ( 4.0A)
0.29A 1fmjB-1fmlA:
56.9
1fmjB-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FML_A_RTLA401_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
6 / 12 LEU A 138
LEU A 139
SER A 142
TYR A 298
ILE A 301
PHE A 310
RTL  A 401 ( 4.6A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-4.2A)
None
RTL  A 401 (-4.3A)
1.33A 1fmlA-1fmlA:
60.1
1fmlA-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FML_A_RTLA401_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
12 / 12 TYR A 105
TYR A 112
TYR A 120
LEU A 138
LEU A 139
SER A 142
HIS A 164
HIS A 197
LEU A 201
TYR A 298
ILE A 303
PHE A 310
RTL  A 401 (-4.6A)
RTL  A 401 ( 4.8A)
RTL  A 401 ( 4.5A)
RTL  A 401 ( 4.6A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-4.4A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.3A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.0A)
RTL  A 401 (-4.3A)
0.00A 1fmlA-1fmlA:
60.1
1fmlA-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FML_B_RTLB501_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
12 / 12 ILE A 111
TYR A 112
TYR A 120
LEU A 138
LEU A 139
SER A 142
HIS A 164
HIS A 197
LEU A 201
TYR A 298
ILE A 303
PHE A 310
RTL  A 401 ( 4.9A)
RTL  A 401 ( 4.8A)
RTL  A 401 ( 4.5A)
RTL  A 401 ( 4.6A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-4.4A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.3A)
RTL  A 401 (-4.2A)
RTL  A 401 ( 4.0A)
RTL  A 401 (-4.3A)
0.04A 1fmlB-1fmlA:
59.2
1fmlB-1fmlA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FML_B_RTLB501_0
(RETINOL DEHYDRATASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
6 / 12 LEU A 138
LEU A 139
SER A 142
TYR A 298
ILE A 301
PHE A 310
RTL  A 401 ( 4.6A)
None
RTL  A 401 (-3.2A)
RTL  A 401 (-4.2A)
None
RTL  A 401 (-4.3A)
1.34A 1fmlB-1fmlA:
59.2
1fmlB-1fmlA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P33_C_MTXC353_1
(PTERIDINE REDUCTASE
1)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
5 / 12 ASP A  52
LEU A 150
LEU A 165
PRO A 171
MET A 174
None
1.34A 1p33C-1fmlA:
undetectable
1p33C-1fmlA:
22.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PJ7_A_FFOA2887_1
(N,N-DIMETHYLGLYCINE
OXIDASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ASP A 113
THR A  34
GLU A  15
None
0.73A 1pj7A-1fmlA:
1.9
1pj7A-1fmlA:
16.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TYR_B_9CRB130_1
(TRANSTHYRETIN)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 7 LEU A 246
LEU A 183
SER A  70
VAL A  66
None
None
A3P  A 400 ( 4.5A)
None
0.88A 1tyrB-1fmlA:
undetectable
1tyrB-1fmlA:
15.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA3_B_STRB2001_2
(MINERALOCORTICOID
RECEPTOR)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 LEU A 106
LEU A 169
MET A 174
None
0.77A 1ya3B-1fmlA:
undetectable
1ya3B-1fmlA:
23.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HZQ_A_STRA300_1
(APOLIPOPROTEIN D)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 7 THR A  33
ALA A  53
PHE A 109
LEU A  38
None
1.11A 2hzqA-1fmlA:
undetectable
2hzqA-1fmlA:
19.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NNK_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.83A 2nnkA-1fmlA:
0.0
2nnkA-1fmlA:
16.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NNK_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.78A 2nnkA-1fmlA:
0.0
2nnkA-1fmlA:
16.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D2T_A_1FLA502_1
(TRANSTHYRETIN)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 7 LEU A 246
LEU A 183
SER A  70
VAL A  66
None
None
A3P  A 400 ( 4.5A)
None
0.81A 3d2tA-1fmlA:
undetectable
3d2tA-1fmlA:
15.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_B_ROCB201_2
(HIV-1 PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.80A 3k4vA-1fmlA:
0.0
3k4vA-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_B_ROCB201_2
(HIV-1 PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.79A 3k4vA-1fmlA:
0.0
3k4vA-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_D_ROCD201_4
(HIV-1 PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.84A 3k4vD-1fmlA:
0.0
3k4vD-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_D_ROCD201_4
(HIV-1 PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.77A 3k4vD-1fmlA:
0.0
3k4vD-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KP2_B_PNNB5002_0
(TRANSCRIPTIONAL
REGULATOR TCAR)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 5 ASN A  91
ALA A  94
ALA A  95
ARG A 102
None
1.09A 3kp2B-1fmlA:
undetectable
3kp2B-1fmlA:
17.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NDT_A_ROCA101_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.70A 3ndtA-1fmlA:
0.0
3ndtA-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NDU_D_ROCD100_3
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.85A 3nduD-1fmlA:
0.0
3nduD-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NDU_D_ROCD100_3
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.73A 3nduD-1fmlA:
0.0
3nduD-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PWR_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.82A 3pwrA-1fmlA:
0.0
3pwrA-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PWR_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.76A 3pwrA-1fmlA:
0.0
3pwrA-1fmlA:
13.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QL6_A_NIMA614_1
(LACTOPEROXIDASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 7 GLN A 330
HIS A 218
GLU A  19
GLU A 215
None
1.38A 3ql6A-1fmlA:
undetectable
3ql6A-1fmlA:
19.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TL9_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 185
VAL A  68
THR A  79
A3P  A 400 (-2.8A)
None
None
0.84A 3tl9A-1fmlA:
0.0
3tl9A-1fmlA:
13.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TL9_A_ROCA401_2
(PROTEASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 ARG A 312
VAL A 293
THR A  77
A3P  A 400 (-3.7A)
None
A3P  A 400 (-3.6A)
0.79A 3tl9A-1fmlA:
0.0
3tl9A-1fmlA:
13.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DF3_A_SAMA301_1
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 TYR A 120
THR A  33
GLU A 118
RTL  A 401 ( 4.5A)
None
None
0.75A 4df3A-1fmlA:
0.7
4df3A-1fmlA:
21.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DF3_B_SAMB301_1
(FIBRILLARIN-LIKE
RRNA/TRNA
2'-O-METHYLTRANSFERA
SE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
3 / 3 TYR A 120
THR A  33
GLU A 118
RTL  A 401 ( 4.5A)
None
None
0.76A 4df3B-1fmlA:
0.7
4df3B-1fmlA:
21.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JX1_E_CAME502_0
(CAMPHOR
5-MONOOXYGENASE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
4 / 5 PHE A 228
TYR A 227
PHE A 217
ILE A 335
None
1.21A 4jx1E-1fmlA:
0.0
4jx1E-1fmlA:
21.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KOV_A_KOVA204_1
(UNCHARACTERIZED
PROTEIN)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
5 / 12 TYR A 141
TYR A 105
GLY A 108
TYR A  46
LEU A 201
None
RTL  A 401 (-4.6A)
None
None
RTL  A 401 ( 4.3A)
1.48A 4kovA-1fmlA:
0.0
4kovA-1fmlA:
18.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DV4_A_NMYA601_1
(CCR4-NOT
TRANSCRIPTION
COMPLEX SUBUNIT
6-LIKE)
1fml RETINOL DEHYDRATASE
(Spodoptera
frugiperda)
5 / 12 TYR A 182
PRO A 171
ASP A 107
LEU A 150
PHE A  67
None
1.40A 5dv4A-1fmlA:
undetectable
5dv4A-1fmlA:
21.31