SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1fr0'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JO3_A_DVAA6_0
(GRAMICIDIN B)
1fr0 ARCB
(Escherichia
coli)
3 / 3 ALA A 745
VAL A 750
TRP A 753
None
0.93A 1jo3A-1fr0A:
undetectable
1jo3A-1fr0A:
10.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JO3_B_DVAB6_0
(GRAMICIDIN B)
1fr0 ARCB
(Escherichia
coli)
3 / 3 ALA A 745
VAL A 750
TRP A 753
None
0.93A 1jo3B-1fr0A:
undetectable
1jo3B-1fr0A:
10.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PGF_A_ADNA502_1
(ADENOSYLHOMOCYSTEINA
SE)
1fr0 ARCB
(Escherichia
coli)
5 / 12 LEU A 728
HIS A 730
ASP A 764
MET A 693
PHE A 689
None
1.40A 4pgfA-1fr0A:
undetectable
4pgfA-1fr0A:
15.78