SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ggl'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1CRB_A_RTLA200_0
(CELLULAR RETINOL
BINDING PROTEIN)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 LEU A  20
ALA A  33
LEU A  36
LYS A  40
THR A  53
ARG A  58
TRP A 106
None
0.82A 1crbA-1gglA:
20.7
1crbA-1gglA:
55.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EII_A_RTLA135_1
(CELLULAR
RETINOL-BINDING
PROTEIN II)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 7 THR A  53
SER A  55
TYR A  60
TRP A 106
None
0.79A 1eiiA-1gglA:
7.3
1eiiA-1gglA:
50.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KGL_A_RTLA175_0
(CELLULAR
RETINOL-BINDING
PROTEIN TYPE I)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ALA A  33
PRO A  38
LYS A  40
SER A  55
PHE A  57
LEU A 117
None
0.91A 1kglA-1gglA:
22.7
1kglA-1gglA:
55.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KGL_A_RTLA175_0
(CELLULAR
RETINOL-BINDING
PROTEIN TYPE I)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 PRO A  38
LYS A  40
SER A  55
PHE A  57
TYR A  60
LEU A 117
None
0.89A 1kglA-1gglA:
22.7
1kglA-1gglA:
55.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KQW_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ILE A  25
LYS A  40
THR A  53
ARG A  58
VAL A  62
LEU A 117
None
0.83A 1kqwA-1gglA:
23.9
1kqwA-1gglA:
47.01
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1MX8_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN I, HOLO)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 TYR A  19
LEU A  20
ALA A  33
LEU A  36
ARG A  58
None
1.07A 1mx8A-1gglA:
19.6
1mx8A-1gglA:
55.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1MX8_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN I, HOLO)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 TYR A  19
LEU A  20
ALA A  33
LEU A  36
PRO A  38
None
0.85A 1mx8A-1gglA:
19.6
1mx8A-1gglA:
55.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1MX8_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN I, HOLO)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 TYR A  19
LEU A  20
ALA A  33
LEU A  36
TYR A  60
None
0.88A 1mx8A-1gglA:
19.6
1mx8A-1gglA:
55.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YC2_B_NCAB508_0
(NAD-DEPENDENT
DEACETYLASE 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 5 GLN A 128
LEU A 117
GLN A  97
TYR A  19
None
1.41A 1yc2B-1gglA:
0.0
1yc2C-1gglA:
0.0
1yc2B-1gglA:
18.52
1yc2C-1gglA:
18.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2RCT_A_RTLA140_0
(RETINOL-BINDING
PROTEIN II, CELLULAR)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 ILE A  25
ALA A  33
LYS A  40
THR A  53
TYR A  60
VAL A  62
LEU A 117
None
0.79A 2rctA-1gglA:
23.1
2rctA-1gglA:
49.29
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2RCT_A_RTLA140_0
(RETINOL-BINDING
PROTEIN II, CELLULAR)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 LYS A  40
THR A  53
ARG A  58
TYR A  60
VAL A  62
LEU A 117
None
0.99A 2rctA-1gglA:
23.1
2rctA-1gglA:
49.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4B3Q_A_NVPA999_1
(REVERSE
TRANSCRIPTASE/RIBONU
CLEASE H)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 7 LEU A 115
VAL A  51
LEU A   4
TYR A   8
None
1.01A 4b3qA-1gglA:
0.0
4b3qA-1gglA:
13.01
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
8 / 12 ILE A  25
ALA A  33
LYS A  40
THR A  53
TYR A  60
VAL A  62
TRP A 106
LEU A 117
None
0.62A 4qynA-1gglA:
23.9
4qynA-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 ILE A  25
LYS A  40
THR A  53
ARG A  58
TRP A 106
None
0.78A 4qynB-1gglA:
23.8
4qynB-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ILE A  25
LYS A  40
THR A  53
TRP A 106
LEU A 117
LEU A 119
None
0.46A 4qynB-1gglA:
23.8
4qynB-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_ACTA202_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 6 TYR A  19
GLU A  72
GLN A  97
TRP A 106
None
0.37A 4qztA-1gglA:
23.8
4qztA-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
8 / 12 ILE A  25
LYS A  40
THR A  53
TYR A  60
VAL A  62
TRP A 106
LEU A 117
LEU A 119
None
0.60A 4qztA-1gglA:
23.8
4qztA-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_B_ACTB201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 5 TYR A  19
TYR A  60
GLU A  72
GLN A  97
None
0.40A 4qztB-1gglA:
23.8
4qztB-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ILE A  25
ALA A  33
LYS A  40
TYR A  60
TRP A 106
LEU A 119
None
0.64A 4qztC-1gglA:
23.5
4qztC-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ILE A  25
LYS A  40
ARG A  58
TYR A  60
TRP A 106
LEU A 119
None
0.67A 4qztC-1gglA:
23.5
4qztC-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 LYS A  40
ARG A  58
TYR A  60
SER A  76
TRP A 106
None
1.01A 4qztC-1gglA:
23.5
4qztC-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 ILE A  25
ALA A  33
LYS A  40
THR A  53
VAL A  62
TRP A 106
LEU A 119
None
0.71A 4qzuA-1gglA:
23.8
4qzuA-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 LYS A  40
THR A  53
ARG A  58
VAL A  62
TRP A 106
LEU A 119
None
0.71A 4qzuA-1gglA:
23.8
4qzuA-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_B_ACTB202_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 7 TYR A  19
TYR A  60
GLN A  97
ARG A 104
TRP A 106
None
0.47A 4qzuB-1gglA:
23.6
4qzuB-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 12 ALA A  33
LYS A  40
THR A  53
TYR A  60
TRP A 106
LEU A 117
None
0.70A 4qzuB-1gglA:
23.6
4qzuB-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_ACTC202_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 6 TYR A  19
GLU A  72
GLN A  97
TRP A 106
LEU A 119
None
0.44A 4qzuC-1gglA:
23.6
4qzuC-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 ILE A  25
ALA A  33
THR A  53
TYR A  60
VAL A  62
LEU A 117
LEU A 119
None
0.78A 4qzuC-1gglA:
23.6
4qzuC-1gglA:
50.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5H8T_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 TYR A  19
LEU A  20
ALA A  33
SER A  55
ARG A  58
TYR A  60
LEU A 117
None
1.03A 5h8tA-1gglA:
23.4
5h8tA-1gglA:
53.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5H8T_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 6 LEU A  36
LYS A  40
THR A  53
TRP A 106
None
0.40A 5h8tA-1gglA:
23.4
5h8tA-1gglA:
53.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HBS_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 TYR A  19
ALA A  33
PRO A  38
SER A  55
LEU A 117
None
0.68A 5hbsA-1gglA:
23.2
5hbsA-1gglA:
53.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HBS_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 12 TYR A  19
ALA A  33
SER A  55
ARG A  58
LEU A 117
None
0.77A 5hbsA-1gglA:
23.2
5hbsA-1gglA:
53.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HBS_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
6 / 8 LEU A  20
LEU A  36
LYS A  40
THR A  53
TYR A  60
TRP A 106
None
0.51A 5hbsA-1gglA:
23.2
5hbsA-1gglA:
53.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJB_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 TYR A  19
ALA A  33
PRO A  38
SER A  55
PHE A  57
TYR A  60
LEU A 117
None
0.80A 5ljbA-1gglA:
23.1
5ljbA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJB_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 TYR A  19
ALA A  33
SER A  55
PHE A  57
ARG A  58
TYR A  60
LEU A 117
None
0.84A 5ljbA-1gglA:
23.1
5ljbA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJB_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 8 LEU A  20
LEU A  36
LYS A  40
THR A  53
TRP A 106
None
0.46A 5ljbA-1gglA:
23.1
5ljbA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJC_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
8 / 12 TYR A  19
ALA A  33
LEU A  36
PRO A  38
SER A  55
PHE A  57
TYR A  60
LEU A 117
None
0.74A 5ljcA-1gglA:
23.2
5ljcA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJC_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
8 / 12 TYR A  19
ALA A  33
LEU A  36
SER A  55
PHE A  57
ARG A  58
TYR A  60
LEU A 117
None
0.82A 5ljcA-1gglA:
23.2
5ljcA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJC_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
4 / 7 LEU A  20
LYS A  40
THR A  53
TRP A 106
None
0.34A 5ljcA-1gglA:
23.2
5ljcA-1gglA:
54.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJD_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
5 / 9 LEU A  20
LEU A  36
THR A  53
TRP A 106
LEU A 117
None
0.54A 5ljdA-1gglA:
23.2
5ljdA-1gglA:
54.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJE_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 LEU A  20
ALA A  33
PRO A  38
SER A  55
PHE A  57
TYR A  60
LEU A 117
None
0.61A 5ljeA-1gglA:
23.2
5ljeA-1gglA:
54.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJE_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
1ggl PROTEIN (CELLULAR
RETINOL-BINDING
PROTEIN III)

(Homo
sapiens)
7 / 12 LEU A  20
ALA A  33
SER A  55
PHE A  57
ARG A  58
TYR A  60
LEU A 117
None
0.71A 5ljeA-1gglA:
23.2
5ljeA-1gglA:
54.07