SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1gqa'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLD_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 ALA A  18
GLY A 116
CYH A 119
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
HEC  A 131 (-3.1A)
 0.32A 2yldA-1gqaA:
17.6		 2yldA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLD_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 116
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.52A 2yldA-1gqaA:
17.6		 2yldA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLD_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 1.01A 2yldA-1gqaA:
17.6		 2yldA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLG_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 5 ALA A  18
GLY A 116
CYH A 119
LYS A 120
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.61A 2ylgA-1gqaA:
17.4		 2ylgA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLG_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.98A 2ylgA-1gqaA:
17.4		 2ylgA-1gqaA:
39.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DTU_C_DXCC576_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 2)		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 8 PRO A  23
ALA A  25
ALA A  28
GLU A  20
 None
 0.83A 3dtuC-1gqaA:
4.5
3dtuD-1gqaA:
undetectable		 3dtuC-1gqaA:
13.67
3dtuD-1gqaA:
19.28
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ZWI_A_ASCA156_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 ALA A  18
GLY A 116
CYH A 119
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
HEC  A 131 (-3.1A)
 0.32A 3zwiA-1gqaA:
17.6		 3zwiA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ZWI_A_ASCA156_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 116
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.51A 3zwiA-1gqaA:
17.6		 3zwiA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ZWI_A_ASCA156_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 1.06A 3zwiA-1gqaA:
17.6		 3zwiA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4CIP_A_ASCA130_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 4 ALA A  18
GLY A 116
CYH A 119
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
HEC  A 131 (-3.1A)
 0.32A 4cipA-1gqaA:
17.7		 4cipA-1gqaA:
39.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4I1R_A_LZUA801_1
(MUCOSA-ASSOCIATED
LYMPHOID TISSUE
LYMPHOMA
TRANSLOCATION
PROTEIN 1)		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 12 VAL A 112
VAL A  94
GLU A  20
PHE A  21
LEU A  24
 None
None
None
HEC  A 131 ( 4.0A)
None
 0.98A 4i1rA-1gqaA:
undetectable		 4i1rA-1gqaA:
16.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1I_B_LOCB502_2
(TUBULIN BETA CHAIN)		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 12 LEU A  97
ALA A 111
MET A  27
ALA A  39
ALA A  43
 None
 1.06A 4x1iB-1gqaA:
undetectable		 4x1iB-1gqaA:
13.04
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JLI_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 5 ALA A  18
GLY A 116
CYH A 119
LYS A 120
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.65A 5jliA-1gqaA:
17.8		 5jliA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JLI_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.95A 5jliA-1gqaA:
17.8		 5jliA-1gqaA:
39.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JRA_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 4 GLY A 116
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.20A 5jraA-1gqaA:
17.5		 5jraA-1gqaA:
39.39
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JRA_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 4 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 1.01A 5jraA-1gqaA:
17.5		 5jraA-1gqaA:
39.39
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JSL_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 4 ALA A  18
GLY A 116
CYH A 119
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
HEC  A 131 (-3.1A)
 0.36A 5jslA-1gqaA:
17.4		 5jslA-1gqaA:
40.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JT4_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 5 ALA A  18
GLY A 116
CYH A 119
LYS A 120
HIS A 123
 HEC  A 131 ( 3.8A)
None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.76A 5jt4A-1gqaA:
17.4		 5jt4A-1gqaA:
39.39
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JT4_A_ASCA202_0
(CYTOCHROME C')		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		4 / 5 GLY A 117
CYH A 119
LYS A 120
HIS A 123
 None
HEC  A 131 (-1.8A)
None
HEC  A 131 (-3.1A)
 0.98A 5jt4A-1gqaA:
17.4		 5jt4A-1gqaA:
39.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KBW_B_RBFB201_1
(RIBOFLAVIN
TRANSPORTER RIBU)		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		5 / 12 GLU A  31
LYS A  29
GLY A  22
ALA A 101
VAL A 115
 None
 1.32A 5kbwB-1gqaA:
undetectable		 5kbwB-1gqaA:
24.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_B_ACTB307_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)		 1gqa CYTOCHROME C'
(Rhodobacter
sphaeroides) 		3 / 3 LEU A  24
ALA A  25
LEU A  97
 None
 0.40A 5uunB-1gqaA:
undetectable		 5uunB-1gqaA:
19.93