SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1j3m'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FIQ_C_SALC1335_1
(XANTHINE OXIDASE)
1j3m THE CONSERVED
HYPOTHETICAL PROTEIN
TT1751

(Thermus
thermophilus)
4 / 8 LEU A  82
THR A   7
LEU A 129
ALA A  10
None
0.82A 1fiqC-1j3mA:
undetectable
1fiqC-1j3mA:
11.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EGV_A_SAMA1300_0
(UPF0088 PROTEIN
AQ_165)
1j3m THE CONSERVED
HYPOTHETICAL PROTEIN
TT1751

(Thermus
thermophilus)
5 / 12 LEU A  82
LEU A  92
THR A   7
LEU A   8
ALA A  15
None
0.76A 2egvA-1j3mA:
undetectable
2egvA-1j3mA:
20.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R9S_C_BEZC264_0
(CARNITINYL-COA
DEHYDRATASE)
1j3m THE CONSERVED
HYPOTHETICAL PROTEIN
TT1751

(Thermus
thermophilus)
4 / 6 ALA A  65
ILE A  72
LEU A 111
ALA A 118
None
0.86A 3r9sC-1j3mA:
undetectable
3r9sC-1j3mA:
20.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UNI_B_SALB1345_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
1j3m THE CONSERVED
HYPOTHETICAL PROTEIN
TT1751

(Thermus
thermophilus)
4 / 8 LEU A  82
THR A   7
LEU A 129
ALA A  10
None
0.81A 3uniB-1j3mA:
undetectable
3uniB-1j3mA:
7.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PXM_B_ESTB2000_1
(ESTROGEN RECEPTOR)
1j3m THE CONSERVED
HYPOTHETICAL PROTEIN
TT1751

(Thermus
thermophilus)
5 / 11 LEU A  61
ALA A  62
LEU A  76
GLY A  55
LEU A  31
None
1.23A 4pxmB-1j3mA:
undetectable
4pxmB-1j3mA:
19.85