SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1j6x'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z2B_C_VLBC800_1
(TUBULIN BETA CHAIN
TUBULIN ALPHA CHAIN)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
4 / 8 VAL A  20
TYR A  37
THR A  95
LEU A 101
None
0.85A 1z2bB-1j6xA:
undetectable
1z2bB-1j6xA:
15.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYS_A_CUA601_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.72A 2dysA-1j6xA:
undetectable
2dysA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DYS_N_CUN601_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.72A 2dysN-1j6xA:
undetectable
2dysN-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIK_A_CUA517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.73A 2eikA-1j6xA:
undetectable
2eikA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIL_A_CUA517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.74A 2eilA-1j6xA:
undetectable
2eilA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIL_N_CUN517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.76A 2eilN-1j6xA:
undetectable
2eilN-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIM_N_CUN517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.74A 2eimN-1j6xA:
undetectable
2eimN-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIN_A_CUA517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.69A 2einA-1j6xA:
undetectable
2einA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIN_N_CUN517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.72A 2einN-1j6xA:
undetectable
2einN-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6R_B_CTCB1385_0
(TETX2 PROTEIN)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
4 / 8 PHE A  41
GLY A  83
GLY A 132
MET A 105
None
0.93A 2y6rB-1j6xA:
undetectable
2y6rB-1j6xA:
18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S33_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.74A 3s33A-1j6xA:
undetectable
3s33A-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S38_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.74A 3s38A-1j6xA:
0.9
3s38A-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S39_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.72A 3s39A-1j6xA:
undetectable
3s39A-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3A_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.75A 3s3aA-1j6xA:
undetectable
3s3aA-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3B_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.73A 3s3bA-1j6xA:
undetectable
3s3bA-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3C_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.73A 3s3cA-1j6xA:
undetectable
3s3cA-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3D_A_CUA803_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.72A 3s3dA-1j6xA:
undetectable
3s3dA-1j6xA:
13.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3X2Q_A_CUA604_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.74A 3x2qA-1j6xA:
undetectable
3x2qA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A7T_A_5FWA1002_1
(SUPEROXIDE DISMUTASE
[CU-ZN])
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 ASN A 127
TRP A 124
ASP A  50
None
1.30A 4a7tA-1j6xA:
0.0
4a7tF-1j6xA:
0.0
4a7tA-1j6xA:
19.76
4a7tF-1j6xA:
19.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKV_B_AERB601_2
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
4 / 5 TYR A  19
ARG A  21
ASP A  24
VAL A  72
None
1.45A 4nkvB-1j6xA:
0.0
4nkvB-1j6xA:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z84_N_CUN604_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.78A 5z84N-1j6xA:
undetectable
5z84N-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCP_A_CUA603_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.76A 5zcpA-1j6xA:
undetectable
5zcpA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCP_N_CUN604_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.78A 5zcpN-1j6xA:
undetectable
5zcpN-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCQ_A_CUA603_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.76A 5zcqA-1j6xA:
undetectable
5zcqA-1j6xA:
12.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCQ_N_CUN603_0
(CYTOCHROME C OXIDASE
SUBUNIT 1)
1j6x AUTOINDUCER-2
PRODUCTION PROTEIN
LUXS

(Helicobacter
pylori)
3 / 3 HIS A  59
HIS A 128
HIS A  55
ZN  A 161 (-3.4A)
ZN  A 161 ( 4.9A)
ZN  A 161 (-3.2A)
0.77A 5zcqN-1j6xA:
undetectable
5zcqN-1j6xA:
12.99