SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1jdl'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD6_0
(GRAMICIDIN A)		 1jdl CYTOCHROME C2, ISO-2
(Rhodospirillum
centenum) 		3 / 3 TRP A  63
ALA A  32
VAL A  36
 HEM  A 500 (-4.1A)
None
None
 0.84A 1c4dC-1jdlA:
undetectable
1c4dD-1jdlA:
undetectable		 1c4dC-1jdlA:
7.92
1c4dD-1jdlA:
7.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W1W_A_CHDA1503_0
(FERROCHELATASE,
MITOCHONDRIAL)		 1jdl CYTOCHROME C2, ISO-2
(Rhodospirillum
centenum) 		4 / 8 ILE A  69
LEU A  72
VAL A  11
GLY A   8
 None
HEM  A 500 ( 4.7A)
None
None
 0.81A 3w1wA-1jdlA:
undetectable		 3w1wA-1jdlA:
16.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O1E_A_C2FA3000_1
(DIHYDROPTEROATE
SYNTHASE DHPS)		 1jdl CYTOCHROME C2, ISO-2
(Rhodospirillum
centenum) 		3 / 3 LYS A  81
ASN A  53
ASP A  85
 None
HEM  A 500 (-3.4A)
None
 0.88A 4o1eA-1jdlA:
undetectable		 4o1eA-1jdlA:
17.47