SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1kqx'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1CBS_A_REAA200_1
(CELLULAR RETINOIC
ACID BINDING PROTEIN
TYPE II)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 PHE A  16
ILE A  32
ALA A  33
THR A  53
LEU A 117
None
0.65A 1cbsA-1kqxA:
20.6
1cbsA-1kqxA:
40.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1CRB_A_RTLA200_0
(CELLULAR RETINOL
BINDING PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 ALA A  33
LEU A  36
THR A  53
ARG A  58
TRP A 106
None
1.08A 1crbA-1kqxA:
21.5
1crbA-1kqxA:
59.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1CRB_A_RTLA200_0
(CELLULAR RETINOL
BINDING PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 PHE A  16
ALA A  33
LEU A  36
LYS A  40
THR A  53
TRP A 106
None
0.74A 1crbA-1kqxA:
21.5
1crbA-1kqxA:
59.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EII_A_RTLA135_1
(CELLULAR
RETINOL-BINDING
PROTEIN II)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 7 GLN A  38
THR A  53
SER A  55
TRP A 106
GLN A 108
None
1.09A 1eiiA-1kqxA:
8.0
1eiiA-1kqxA:
73.13
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KGL_A_RTLA175_1
(CELLULAR
RETINOL-BINDING
PROTEIN TYPE I)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 7 LEU A  36
THR A  53
TRP A 106
GLN A 108
None
0.80A 1kglA-1kqxA:
24.3
1kglA-1kqxA:
59.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KQW_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 ILE A  25
GLN A  38
LYS A  40
THR A  51
THR A  53
VAL A  62
LEU A  77
LEU A 117
None
0.96A 1kqwA-1kqxA:
26.9
1kqwA-1kqxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KQW_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 ILE A  25
GLN A  38
THR A  51
THR A  53
ARG A  58
LEU A  77
None
1.20A 1kqwA-1kqxA:
26.9
1kqwA-1kqxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KQW_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
10 / 12 PHE A  16
MET A  20
ILE A  25
GLN A  38
LYS A  40
THR A  51
THR A  53
VAL A  62
LEU A 117
ILE A 119
None
0.45A 1kqwA-1kqxA:
26.9
1kqwA-1kqxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1KQW_A_RTLA135_0
(CELLULAR
RETINOL-BINDING
PROTEIN)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 PHE A  16
MET A  20
ILE A  25
GLN A  38
THR A  51
THR A  53
ARG A  58
None
0.75A 1kqwA-1kqxA:
26.9
1kqwA-1kqxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2FR3_A_REAA300_1
(CELLULAR RETINOIC
ACID BINDING PROTEIN
2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 PHE A  16
ILE A  32
ALA A  33
THR A  53
LEU A 117
None
0.56A 2fr3A-1kqxA:
20.8
2fr3A-1kqxA:
40.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2G78_A_REAA200_1
(CELLULAR RETINOIC
ACID-BINDING PROTEIN
2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 PHE A  16
ILE A  32
ALA A  33
THR A  53
LEU A 117
None
0.58A 2g78A-1kqxA:
20.9
2g78A-1kqxA:
40.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2JN3_A_JN3A131_2
(FATTY ACID-BINDING
PROTEIN, LIVER)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 6 LEU A  93
LYS A   1
ILE A  42
PHE A   4
None
1.24A 2jn3A-1kqxA:
18.3
2jn3A-1kqxA:
30.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2RCT_A_RTLA140_0
(RETINOL-BINDING
PROTEIN II, CELLULAR)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 ILE A  25
ALA A  33
LYS A  40
THR A  53
VAL A  62
LEU A  77
GLN A 108
LEU A 117
None
1.11A 2rctA-1kqxA:
24.7
2rctA-1kqxA:
72.46
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2RCT_A_RTLA140_0
(RETINOL-BINDING
PROTEIN II, CELLULAR)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 PHE A  16
MET A  20
ILE A  25
ALA A  33
LYS A  40
THR A  53
VAL A  62
GLN A 108
LEU A 117
None
0.64A 2rctA-1kqxA:
24.7
2rctA-1kqxA:
72.46
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2RCT_A_RTLA140_1
(RETINOL-BINDING
PROTEIN II, CELLULAR)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
3 / 3 GLN A  38
THR A  51
TRP A 106
None
0.17A 2rctA-1kqxA:
24.7
2rctA-1kqxA:
72.46
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 ILE A  25
ALA A  33
LYS A  40
THR A  51
THR A  53
VAL A  62
LEU A  77
TRP A 106
LEU A 117
None
1.14A 4qynA-1kqxA:
25.1
4qynA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 MET A  20
ILE A  25
THR A  51
TYR A  60
VAL A  62
TRP A 106
None
1.46A 4qynA-1kqxA:
25.1
4qynA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
10 / 12 PHE A  16
MET A  20
ILE A  25
ALA A  33
LYS A  40
THR A  51
THR A  53
VAL A  62
TRP A 106
LEU A 117
None
0.65A 4qynA-1kqxA:
25.1
4qynA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 ILE A  25
GLN A  38
LYS A  40
THR A  53
LEU A  77
TRP A 106
LEU A 117
None
1.08A 4qynB-1kqxA:
25.3
4qynB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 ILE A  25
GLN A  38
THR A  53
ARG A  58
LEU A  77
TRP A 106
None
1.20A 4qynB-1kqxA:
25.3
4qynB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 PHE A  16
MET A  20
ILE A  25
GLN A  38
LYS A  40
THR A  51
THR A  53
TRP A 106
LEU A 117
None
0.64A 4qynB-1kqxA:
25.3
4qynB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 PHE A  16
MET A  20
ILE A  25
GLN A  38
THR A  51
THR A  53
ARG A  58
TRP A 106
None
0.75A 4qynB-1kqxA:
25.3
4qynB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_ACTA202_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 6 GLU A  72
THR A  74
GLN A  97
TRP A 106
None
0.42A 4qztA-1kqxA:
25.7
4qztA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_ACTA202_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 6 THR A  74
LEU A  77
GLN A  97
TRP A 106
None
0.70A 4qztA-1kqxA:
25.7
4qztA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 MET A  20
ILE A  25
GLN A  38
LYS A  40
THR A  53
VAL A  62
TRP A 106
GLN A 108
LEU A 117
None
0.64A 4qztA-1kqxA:
25.7
4qztA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 MET A  20
ILE A  25
TYR A  60
VAL A  62
TRP A 106
None
1.42A 4qztA-1kqxA:
25.7
4qztA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_ACTC202_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 4 GLU A  72
THR A  74
GLN A  97
TRP A 106
None
0.35A 4qztC-1kqxA:
25.7
4qztC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 ILE A  25
ALA A  33
GLN A  38
ARG A  58
LEU A  77
TRP A 106
None
1.01A 4qztC-1kqxA:
25.7
4qztC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
6 / 12 ILE A  25
ALA A  33
GLN A  38
LYS A  40
LEU A  77
TRP A 106
None
0.90A 4qztC-1kqxA:
25.7
4qztC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 PHE A  16
ILE A  25
ALA A  33
GLN A  38
LYS A  40
THR A  51
TRP A 106
None
0.57A 4qztC-1kqxA:
25.7
4qztC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZT_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 PHE A  16
ILE A  25
ALA A  33
GLN A  38
THR A  51
ARG A  58
TRP A 106
None
0.70A 4qztC-1kqxA:
25.7
4qztC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 12 GLN A  38
THR A  53
ARG A  58
VAL A  62
LEU A 117
None
1.37A 4qzuA-1kqxA:
25.5
4qzuA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 ILE A  25
ALA A  33
GLN A  38
LYS A  40
THR A  53
VAL A  62
LEU A  77
TRP A 106
None
1.09A 4qzuA-1kqxA:
25.5
4qzuA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 ILE A  25
ALA A  33
GLN A  38
THR A  53
ARG A  58
VAL A  62
LEU A  77
None
1.16A 4qzuA-1kqxA:
25.5
4qzuA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 PHE A  16
ILE A  25
ALA A  33
GLN A  38
LYS A  40
THR A  51
THR A  53
VAL A  62
TRP A 106
None
0.71A 4qzuA-1kqxA:
25.5
4qzuA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 PHE A  16
ILE A  25
ALA A  33
GLN A  38
THR A  51
THR A  53
ARG A  58
VAL A  62
None
0.80A 4qzuA-1kqxA:
25.5
4qzuA-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_B_ACTB202_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 7 LEU A  77
GLN A  97
ARG A 104
TRP A 106
None
0.68A 4qzuB-1kqxA:
25.7
4qzuB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 ALA A  33
GLN A  38
LYS A  40
THR A  53
LEU A  77
TRP A 106
LEU A 117
None
1.03A 4qzuB-1kqxA:
25.7
4qzuB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
8 / 12 PHE A  16
MET A  20
ALA A  33
GLN A  38
LYS A  40
THR A  53
TRP A 106
LEU A 117
None
0.55A 4qzuB-1kqxA:
25.7
4qzuB-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_ACTC202_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 6 GLU A  72
THR A  74
GLN A  97
TRP A 106
None
0.35A 4qzuC-1kqxA:
25.8
4qzuC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
7 / 12 ILE A  25
ALA A  33
GLN A  38
THR A  53
VAL A  62
LEU A  77
LEU A 117
None
0.87A 4qzuC-1kqxA:
25.8
4qzuC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_RTLC201_0
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
9 / 12 PHE A  16
MET A  20
ILE A  25
ALA A  33
GLN A  38
THR A  51
THR A  53
VAL A  62
LEU A 117
None
0.55A 4qzuC-1kqxA:
25.8
4qzuC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QZU_C_RTLC201_1
(RETINOL-BINDING
PROTEIN 2)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
3 / 3 LYS A  40
TRP A 106
GLN A 108
None
0.52A 4qzuC-1kqxA:
25.8
4qzuC-1kqxA:
75.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5H8T_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 6 LYS A  40
THR A  53
TRP A 106
GLN A 108
None
0.46A 5h8tA-1kqxA:
24.2
5h8tA-1kqxA:
58.96
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HBS_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
5 / 8 LEU A  36
LYS A  40
THR A  53
TRP A 106
GLN A 108
None
0.85A 5hbsA-1kqxA:
24.2
5hbsA-1kqxA:
58.96
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJB_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 8 LEU A  36
LYS A  40
THR A  53
GLN A 108
None
0.87A 5ljbA-1kqxA:
24.6
5ljbA-1kqxA:
58.96
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LJB_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
1kqx CELLULAR
RETINOL-BINDING
PROTEIN

(Danio
rerio)
4 / 8 LYS A  40
THR A  53
TRP A 106
GLN A 108
None
0.46A 5ljbA-1kqxA:
24.6
5ljbA-1kqxA:
58.96