SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ly1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q63_A_1UNA1001_4
(PROTEASE RETROPEPSIN)		 1ly1 POLYNUCLEOTIDE
KINASE
(Escherichia
virus
T4) 		3 / 3 ASP A  35
ASN A  33
THR A  67
 SO4  A 602 ( 3.7A)
None
None
 0.73A 2q63B-1ly1A:
undetectable		 2q63B-1ly1A:
19.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K13_C_THHC643_1
(5-METHYLTETRAHYDROFO
LATE-HOMOCYSTEINE
METHYLTRANSFERASE)		 1ly1 POLYNUCLEOTIDE
KINASE
(Escherichia
virus
T4) 		3 / 3 ASN A  31
ASP A  36
ARG A 122
 None
 0.93A 3k13C-1ly1A:
undetectable		 3k13C-1ly1A:
21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LMN_A_EUIA503_2
(DUAL SPECIFICITY
MITOGEN-ACTIVATED
PROTEIN KINASE
KINASE 1)		 1ly1 POLYNUCLEOTIDE
KINASE
(Escherichia
virus
T4) 		3 / 3 ASP A  85
VAL A 111
ASN A  31
 SO4  A 602 (-4.3A)
None
None
 0.48A 4lmnA-1ly1A:
undetectable		 4lmnA-1ly1A:
24.57