SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1msb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CYX_A_ROCA201_2
(HIV-1 PROTEASE)		 1msb MANNOSE-BINDING
PROTEIN-A
(Rattus
rattus) 		3 / 3 ARG A 118
VAL A 150
THR A 114
 None
 0.72A 3cyxA-1msbA:
undetectable		 3cyxA-1msbA:
18.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_A_SAMA501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)		 1msb MANNOSE-BINDING
PROTEIN-A
(Rattus
rattus) 		5 / 11 LEU A 127
GLU A 218
GLY A 133
VAL A 113
ALA A 215
 None
 1.00A 5o96A-1msbA:
undetectable
5o96B-1msbA:
undetectable		 5o96A-1msbA:
17.08
5o96B-1msbA:
17.08