SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1nbb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DMI_A_BHSA1610_1
(NITRIC OXIDE
SYNTHASE)		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 8 VAL A  38
ALA A  99
PHE A  31
GLU A  39
 None
 1.01A 1dmiA-1nbbA:
undetectable
1dmiB-1nbbA:
0.0		 1dmiA-1nbbA:
15.91
1dmiB-1nbbA:
15.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GX8_A_RTLA1163_0
(BETA-LACTOGLOBULIN)		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		5 / 9 LEU A 114
GLU A  39
LYS A  42
ILE A  46
MET A  88
 HEM  A 130 ( 4.7A)
None
None
None
HEM  A 130 ( 4.2A)
 1.24A 1gx8A-1nbbA:
undetectable		 1gx8A-1nbbA:
24.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UDU_A_CIAA1003_1
(CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE)		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		5 / 11 TYR A  13
VAL A  51
ALA A  52
PHE A  55
MET A  78
 NBN  A 131 ( 4.3A)
NBN  A 131 (-4.3A)
None
HEM  A 130 ( 4.9A)
None
 1.28A 1uduA-1nbbA:
0.6		 1uduA-1nbbA:
15.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLD_A_ASCA130_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.59A 2yldA-1nbbA:
17.6		 2yldA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLD_A_ASCA130_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 1.06A 2yldA-1nbbA:
17.6		 2yldA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLG_A_ASCA130_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.17A 2ylgA-1nbbA:
17.5		 2ylgA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2YLG_A_ASCA130_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.99A 2ylgA-1nbbA:
17.5		 2ylgA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ZWI_A_ASCA156_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.61A 3zwiA-1nbbA:
17.6		 3zwiA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ZWI_A_ASCA156_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 1.12A 3zwiA-1nbbA:
17.6		 3zwiA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JLI_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.24A 5jliA-1nbbA:
17.7		 5jliA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JLI_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.98A 5jliA-1nbbA:
17.7		 5jliA-1nbbA:
31.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JRA_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 4 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.28A 5jraA-1nbbA:
17.5		 5jraA-1nbbA:
31.34
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JRA_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 4 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 1.05A 5jraA-1nbbA:
17.5		 5jraA-1nbbA:
31.34
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JT4_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 115
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 0.31A 5jt4A-1nbbA:
17.4		 5jt4A-1nbbA:
31.58
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5JT4_A_ASCA202_0
(CYTOCHROME C')		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 5 GLY A 116
CYH A 118
LYS A 119
HIS A 122
 None
HEM  A 130 (-1.7A)
None
HEM  A 130 (-3.2A)
 1.02A 5jt4A-1nbbA:
17.4		 5jt4A-1nbbA:
31.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y2T_B_8LXB501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 1nbb CYTOCHROME C'
(Rhodobacter
capsulatus) 		4 / 8 GLU A  69
SER A  20
MET A  88
LEU A 111
 HEM  A 130 (-2.9A)
None
HEM  A 130 ( 4.2A)
None
 0.97A 5y2tB-1nbbA:
undetectable		 5y2tB-1nbbA:
undetectable