SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ns5'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EGV_A_SAMA1300_0
(UPF0088 PROTEIN
AQ_165)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
GLY A 103
GLY A 107
LEU A 122
LEU A 127
None
0.48A 2egvA-1ns5A:
8.3
2egvA-1ns5A:
21.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EGV_B_SAMB1400_0
(UPF0088 PROTEIN
AQ_165)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
GLY A 103
GLY A 107
LEU A 122
LEU A 127
None
0.41A 2egvB-1ns5A:
8.2
2egvB-1ns5A:
21.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QMM_A_SAMA301_0
(UPF0217 PROTEIN
AF_1056)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 9 LEU A  72
GLY A 103
GLY A 104
SER A 121
SER A 123
LEU A 127
None
1.25A 2qmmA-1ns5A:
8.2
2qmmA-1ns5A:
24.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QMM_A_SAMA301_0
(UPF0217 PROTEIN
AF_1056)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
7 / 9 LEU A  72
ILE A 102
GLY A 103
GLY A 107
SER A 121
SER A 123
LEU A 127
None
0.57A 2qmmA-1ns5A:
8.2
2qmmA-1ns5A:
24.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QMM_B_SAMB301_0
(UPF0217 PROTEIN
AF_1056)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 11 GLY A 104
GLY A 107
SER A 121
LEU A 122
SER A 123
LEU A 127
None
1.29A 2qmmA-1ns5A:
8.1
2qmmB-1ns5A:
8.0
2qmmA-1ns5A:
24.88
2qmmB-1ns5A:
24.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QMM_B_SAMB301_0
(UPF0217 PROTEIN
AF_1056)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
8 / 11 LEU A  72
ILE A 102
GLY A 103
GLY A 107
SER A 121
LEU A 122
SER A 123
LEU A 127
None
0.72A 2qmmA-1ns5A:
8.1
2qmmB-1ns5A:
8.0
2qmmA-1ns5A:
24.88
2qmmB-1ns5A:
24.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V3K_A_SAMA1254_0
(ESSENTIAL FOR
MITOTIC GROWTH 1)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 LEU A  72
GLY A 103
LEU A 122
SER A 123
LEU A 127
None
0.64A 2v3kA-1ns5A:
7.5
2v3kA-1ns5A:
23.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI9_X_SAMX501_0
(UPF0217 PROTEIN
MJ1640)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 9 GLY A 104
SER A 121
LEU A 122
SER A 123
LEU A 127
None
0.85A 3ai9X-1ns5A:
7.3
3ai9X-1ns5A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI9_X_SAMX501_0
(UPF0217 PROTEIN
MJ1640)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
7 / 9 LEU A  72
ILE A 102
GLY A 103
SER A 121
LEU A 122
SER A 123
LEU A 127
None
0.58A 3ai9X-1ns5A:
7.3
3ai9X-1ns5A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AIA_A_SAMA206_0
(UPF0217 PROTEIN
MJ1640)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
4 / 6 LEU A  72
GLY A 103
LEU A 122
SER A 123
None
0.52A 3aiaA-1ns5A:
7.1
3aiaA-1ns5A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AXZ_A_ADNA401_1
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
GLY A 103
GLY A 107
SER A 121
LEU A 127
None
0.66A 3axzA-1ns5A:
9.4
3axzA-1ns5A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EYS_A_ACTA402_0
(MCCC FAMILY PROTEIN)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
4 / 6 SER A  99
ASP A  97
ASP A  94
ARG A  96
None
1.18A 4eysA-1ns5A:
2.3
4eysA-1ns5A:
19.23
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4FAK_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 ILE A  74
GLY A 104
GLY A 107
SER A 123
THR A 126
None
0.97A 4fakA-1ns5A:
23.4
4fakA-1ns5A:
33.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4FAK_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
7 / 10 LEU A  72
ILE A  74
ILE A 102
GLY A 103
GLY A 107
SER A 123
THR A 126
None
0.54A 4fakA-1ns5A:
23.4
4fakA-1ns5A:
33.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YVG_A_SAMA301_0
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
GLY A 103
GLY A 107
SER A 121
LEU A 127
None
0.74A 4yvgA-1ns5A:
7.3
4yvgA-1ns5A:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NFJ_A_SAMA501_0
(MITOCHONDRIAL
RIBONUCLEASE P
PROTEIN 1)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
ILE A 102
GLY A 103
LEU A 122
LEU A 127
None
0.80A 5nfjA-1ns5A:
5.9
5nfjA-1ns5A:
22.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_B_SAMB501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 9 LEU A  72
ILE A 102
GLY A 103
GLY A 107
LEU A 122
LEU A 127
None
0.42A 5o96A-1ns5A:
9.9
5o96B-1ns5A:
10.2
5o96A-1ns5A:
22.05
5o96B-1ns5A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_C_SAMC501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 7 LEU A  72
GLY A 103
GLY A 107
SER A 121
LEU A 127
None
0.89A 5o96C-1ns5A:
9.0
5o96C-1ns5A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_D_SAMD501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 LEU A  72
ILE A 102
GLY A 103
GLY A 107
LEU A 127
None
0.59A 5o96C-1ns5A:
9.0
5o96D-1ns5A:
9.9
5o96C-1ns5A:
22.05
5o96D-1ns5A:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5O96_H_SAMH501_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE E)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 LEU A  72
GLY A 103
GLY A 107
LEU A 122
LEU A 127
None
0.46A 5o96G-1ns5A:
6.2
5o96H-1ns5A:
5.6
5o96G-1ns5A:
22.05
5o96H-1ns5A:
22.05
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
7 / 12 ILE A  74
GLY A 104
GLY A 107
SER A 123
THR A 126
LEU A 127
VAL A 132
None
1.14A 5twjA-1ns5A:
28.8
5twjA-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 12 ILE A  74
GLY A 107
SER A 123
THR A 126
LEU A 127
HIS A 129
None
0.83A 5twjA-1ns5A:
28.8
5twjA-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 12 LEU A  72
GLY A 104
LEU A 122
SER A 123
THR A 126
LEU A 127
None
0.96A 5twjA-1ns5A:
28.8
5twjA-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_A_SAMA201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
11 / 12 LEU A  72
ILE A  74
ILE A 102
GLY A 103
GLY A 107
SER A 121
LEU A 122
SER A 123
THR A 126
LEU A 127
VAL A 132
None
0.33A 5twjA-1ns5A:
28.8
5twjA-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_B_SAMB201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
6 / 10 ILE A  74
GLY A 104
GLY A 107
SER A 123
LEU A 127
VAL A 132
None
1.18A 5twjB-1ns5A:
28.4
5twjB-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_B_SAMB201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 ILE A  74
GLY A 107
SER A 123
LEU A 127
HIS A 129
None
0.93A 5twjB-1ns5A:
28.4
5twjB-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_B_SAMB201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 LEU A  72
GLY A 104
LEU A 122
SER A 123
LEU A 127
None
0.85A 5twjB-1ns5A:
28.4
5twjB-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_B_SAMB201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
9 / 10 LEU A  72
ILE A  74
ILE A 102
GLY A 103
GLY A 107
LEU A 122
SER A 123
LEU A 127
VAL A 132
None
0.37A 5twjB-1ns5A:
28.4
5twjB-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_C_SAMC201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 ASP A  73
GLY A 107
LEU A 108
SER A 121
SER A 123
None
1.13A 5twjC-1ns5A:
28.7
5twjC-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_C_SAMC201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 ILE A  74
GLY A 104
SER A 123
LEU A 127
VAL A 132
None
0.92A 5twjC-1ns5A:
28.7
5twjC-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_C_SAMC201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
11 / 12 LEU A  72
ASP A  73
ILE A  74
ILE A 102
GLY A 103
LEU A 108
LYS A 113
SER A 121
LEU A 122
SER A 123
VAL A 132
None
0.46A 5twjC-1ns5A:
28.7
5twjC-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_C_SAMC201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
11 / 12 LEU A  72
ASP A  73
ILE A  74
ILE A 102
GLY A 103
LEU A 108
SER A 121
LEU A 122
SER A 123
LEU A 127
VAL A 132
None
0.40A 5twjC-1ns5A:
28.7
5twjC-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_D_SAMD201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
8 / 11 ILE A  74
GLY A 104
GLY A 107
LEU A 122
SER A 123
THR A 126
LEU A 127
VAL A 132
None
1.08A 5twjD-1ns5A:
29.1
5twjD-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_D_SAMD201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
11 / 11 LEU A  72
ASP A  73
ILE A  74
ILE A 102
GLY A 103
GLY A 107
LEU A 122
SER A 123
THR A 126
LEU A 127
VAL A 132
None
0.39A 5twjD-1ns5A:
29.1
5twjD-1ns5A:
95.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5TWJ_D_SAMD201_0
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE H)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
8 / 11 LEU A  72
ILE A 102
GLY A 103
GLY A 104
LEU A 122
SER A 123
THR A 126
LEU A 127
None
1.18A 5twjD-1ns5A:
29.1
5twjD-1ns5A:
95.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZHM_B_SAMB301_1
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 12 LEU A  72
GLY A 103
GLY A 107
SER A 121
LEU A 127
None
0.79A 5zhmB-1ns5A:
10.8
5zhmB-1ns5A:
22.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6F6N_A_SREA508_1
(ENVELOPE
GLYCOPROTEIN,ENVELOP
E GLYCOPROTEIN,GP1
ENVELOPE
GLYCOPROTEIN)
1ns5 HYPOTHETICAL PROTEIN
YBEA

(Escherichia
coli)
5 / 10 ILE A  69
VAL A 136
ALA A 137
LEU A 101
LEU A  72
None
0.94A 6f6nA-1ns5A:
undetectable
6f6nB-1ns5A:
undetectable
6f6nA-1ns5A:
18.79
6f6nB-1ns5A:
25.41