SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1odu'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DED_A_QPSA2001_1
(CYCLODEXTRIN
GLUCANOTRANSFERASE)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 6 TRP A 227
GLY A 256
ASN A 252
PRO A 258
 None
 1.39A 1dedA-1oduA:
11.5		 1dedA-1oduA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FXV_B_PNNB1001_0
(PENICILLIN ACYLASE)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 7 PHE A  96
PHE A  91
ALA A  97
PHE A 142
 None
 1.23A 1fxvA-1oduA:
0.0
1fxvB-1oduA:
0.0		 1fxvA-1oduA:
18.34
1fxvB-1oduA:
22.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MCN_P_DHIP1_0
(IMMUNOGLOBULIN
LAMBDA DIMER MCG
(LIGHT CHAIN)
PEPTIDE
N-ACETYL-D-HIS-L-PRO
-NH2)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 PHE A  96
TYR A  82
PRO A  41
 None
 1.13A 1mcnA-1oduA:
undetectable
1mcnB-1oduA:
undetectable
1mcnP-1oduA:
undetectable		 1mcnA-1oduA:
18.26
1mcnB-1oduA:
18.26
1mcnP-1oduA:
0.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QHS_A_CLMA999_0
(PROTEIN
(CHLORAMPHENICOL
PHOSPHOTRANSFERASE))		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 12 ILE A 398
ILE A 374
PHE A 376
PHE A 387
VAL A 408
 None
 0.97A 1qhsA-1oduA:
undetectable		 1qhsA-1oduA:
15.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_F_ASDF1224_1
(GLUTATHIONE
S-TRANSFERASE A3)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 8 LEU A 323
LEU A 321
ALA A 117
LEU A 348
 None
 0.67A 2vcvF-1oduA:
undetectable		 2vcvF-1oduA:
19.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_P_ASDP1224_1
(GLUTATHIONE
S-TRANSFERASE A3)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 8 LEU A 323
LEU A 321
ALA A 117
LEU A 348
 None
 0.70A 2vcvP-1oduA:
0.0		 2vcvP-1oduA:
19.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YOE_C_FL7C1318_1
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 8 GLY A 406
ILE A 398
VAL A 443
SER A 404
 None
 0.97A 2yoeB-1oduA:
0.0
2yoeC-1oduA:
0.0		 2yoeB-1oduA:
22.17
2yoeC-1oduA:
22.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZS9_A_PAUA603_0
(PANTOTHENATE KINASE)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 6 VAL A 145
ASP A 156
TYR A 216
ASN A 143
 None
 1.43A 2zs9A-1oduA:
0.0		 2zs9A-1oduA:
21.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_C_SVRC505_2
(PHOSPHOLIPASE A2)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 5 VAL A 314
VAL A 315
PHE A 262
ARG A 378
 None
 0.99A 3bjwH-1oduA:
0.0		 3bjwH-1oduA:
14.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_C_SVRC507_2
(PHOSPHOLIPASE A2)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 6 VAL A 314
VAL A 315
PHE A 262
ARG A 378
 None
 0.94A 3bjwF-1oduA:
0.0		 3bjwF-1oduA:
14.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_G_SVRG506_2
(PHOSPHOLIPASE A2)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 5 VAL A 314
VAL A 315
PHE A 262
ARG A 378
 None
 1.12A 3bjwB-1oduA:
0.0		 3bjwB-1oduA:
14.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BPX_B_SALB258_1
(TRANSCRIPTIONAL
REGULATOR)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 11 ALA A 158
LEU A 157
ILE A 123
PRO A 124
GLY A 169
 None
 1.46A 3bpxA-1oduA:
0.0
3bpxB-1oduA:
0.0		 3bpxA-1oduA:
15.57
3bpxB-1oduA:
15.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LS4_H_TCIH220_1
(HEAVY CHAIN OF
ANTIBODY FAB
FRAGMENT)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 10 VAL A  40
LEU A 153
GLY A 329
GLY A 331
TRP A 105
 None
 1.02A 3ls4H-1oduA:
undetectable		 3ls4H-1oduA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W1W_B_CHDB504_0
(FERROCHELATASE,
MITOCHONDRIAL)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 12 LEU A 321
PHE A  29
ILE A 286
GLN A 337
VAL A 220
 None
 1.39A 3w1wB-1oduA:
undetectable		 3w1wB-1oduA:
22.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DV1_A_SRYA1601_1
(16S RRNA
RIBOSOMAL PROTEIN
S12)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 LYS A 317
LYS A 274
PRO A 276
 None
 1.10A 4dv1L-1oduA:
undetectable		 4dv1L-1oduA:
14.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A7M_A_ACTA1923_0
(BETA-XYLOSIDASE)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 ASP A 190
ARG A 186
TYR A 187
 None
 1.05A 5a7mA-1oduA:
4.3		 5a7mA-1oduA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A7M_B_ACTB1924_0
(BETA-XYLOSIDASE)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 ASP A 190
ARG A 186
TYR A 187
 None
 1.05A 5a7mB-1oduA:
2.4		 5a7mB-1oduA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HW8_C_FK5C201_1
(FK506-BINDING
PROTEIN 1)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 10 ARG A 363
VAL A 397
ILE A 396
LEU A 442
PHE A 387
 None
 1.24A 5hw8C-1oduA:
undetectable
5hw8H-1oduA:
undetectable		 5hw8C-1oduA:
15.75
5hw8H-1oduA:
15.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ND7_B_TA1B601_2
(TUBULIN BETA-2B
CHAIN)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 THR A 125
PRO A 149
ARG A 147
 None
 0.76A 5nd7B-1oduA:
undetectable		 5nd7B-1oduA:
21.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ODQ_D_ACTD202_0
(METHYL-VIOLOGEN
REDUCING
HYDROGENASE, SUBUNIT
D)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		3 / 3 HIS A 129
GLU A  66
TRP A  67
 FUL  A1448 (-4.0A)
FUL  A1448 (-3.3A)
FUL  A1448 (-4.1A)
 1.13A 5odqD-1oduA:
undetectable		 5odqD-1oduA:
15.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UXD_A_ZITA501_1
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E MPHH)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		4 / 7 TYR A  87
PHE A  91
ALA A  97
GLY A 148
 None
 0.85A 5uxdA-1oduA:
0.0		 5uxdA-1oduA:
20.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_A_PCFA1807_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 7 GLY A  30
LEU A 323
GLY A 118
LEU A 348
ILE A 386
 None
 1.30A 5vkqA-1oduA:
undetectable
5vkqB-1oduA:
undetectable		 5vkqA-1oduA:
14.22
5vkqB-1oduA:
14.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6GNF_A_QPSA602_1
(-)		 1odu PUTATIVE
ALPHA-L-FUCOSIDASE
(Thermotoga
maritima) 		5 / 12 ASN A  62
PHE A  59
ASN A 293
GLU A  66
GLY A 291
 None
None
None
FUL  A1448 (-3.3A)
None
 1.15A 6gnfA-1oduA:
2.0		 6gnfA-1oduA:
21.66