SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ogy'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_B_DVAB8_0
(GRAMICIDIN A)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 VAL A 763
VAL A 797
TRP A 689
None
0.95A 1av2A-1ogyA:
undetectable
1av2B-1ogyA:
undetectable
1av2A-1ogyA:
5.19
1av2B-1ogyA:
5.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_A_DVAA6_0
(GRAMICIDIN A)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 ALA A 500
VAL A 503
TRP A 519
None
0.99A 1c4dA-1ogyA:
undetectable
1c4dB-1ogyA:
undetectable
1c4dA-1ogyA:
5.19
1c4dB-1ogyA:
5.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_B_DVAB6_0
(GRAMICIDIN A)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 TRP A 519
ALA A 500
VAL A 503
None
0.96A 1c4dA-1ogyA:
undetectable
1c4dB-1ogyA:
undetectable
1c4dA-1ogyA:
5.19
1c4dB-1ogyA:
5.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FDU_A_ESTA351_1
(17-BETA-HYDROXYSTERO
ID DEHYDROGENASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A  57
LEU A  60
GLY A  42
LEU A 522
VAL A 503
SF4  A1801 (-3.6A)
None
None
None
None
1.00A 1fduA-1ogyA:
undetectable
1fduA-1ogyA:
18.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JB0_A_PQNA2001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.07A 1jb0A-1ogyA:
undetectable
1jb0A-1ogyA:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_B_DVAB8_0
(GRAMICIDIN D)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 VAL A 763
VAL A 797
TRP A 689
None
0.84A 1w5uA-1ogyA:
undetectable
1w5uB-1ogyA:
undetectable
1w5uA-1ogyA:
5.19
1w5uB-1ogyA:
5.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WOP_A_FFOA2888_0
(AMINOMETHYLTRANSFERA
SE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 10 LEU A 367
LEU A 364
ILE A 248
ILE A 318
LEU A 241
None
1.25A 1wopA-1ogyA:
0.0
1wopA-1ogyA:
19.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_A_TFPA204_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 PHE A 715
LEU B  21
PHE A 769
SER A 772
None
0.96A 1wrlA-1ogyA:
undetectable
1wrlB-1ogyA:
0.0
1wrlA-1ogyA:
7.60
1wrlB-1ogyA:
7.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_A_TFPA204_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 LEU A 536
PHE A 449
MET A 100
VAL A  99
None
1.11A 1wrlA-1ogyA:
undetectable
1wrlB-1ogyA:
0.0
1wrlA-1ogyA:
7.60
1wrlB-1ogyA:
7.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_B_TFPB203_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 6 PHE A 715
LEU B  21
PHE A 769
SER A 772
None
1.03A 1wrlB-1ogyA:
undetectable
1wrlB-1ogyA:
7.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRL_E_TFPE212_1
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 PHE A 715
LEU B  21
PHE A 769
SER A 772
None
1.03A 1wrlE-1ogyA:
undetectable
1wrlE-1ogyA:
7.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DQY_A_CHDA1_0
(LIVER
CARBOXYLESTERASE 1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 TRP A 549
LYS A 109
LEU A 108
PRO A 550
None
1.44A 2dqyA-1ogyA:
0.0
2dqyA-1ogyA:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DQY_B_CHDB2_0
(LIVER
CARBOXYLESTERASE 1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 TRP A 549
LYS A 109
PRO A 550
None
1.35A 2dqyB-1ogyA:
0.0
2dqyB-1ogyA:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HS2_B_017B203_1
(PROTEASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 6 PRO A 674
LEU A 671
ARG A 353
GLY A 354
None
1.15A 2hs2B-1ogyA:
0.0
2hs2B-1ogyA:
8.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_C_DVAC8_0
(GRAMICIDIN D)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 VAL A 797
TRP A 689
VAL A 763
None
0.84A 2izqC-1ogyA:
undetectable
2izqD-1ogyA:
undetectable
2izqC-1ogyA:
5.19
2izqD-1ogyA:
5.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JN3_A_JN3A130_2
(FATTY ACID-BINDING
PROTEIN, LIVER)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 LEU A 780
PRO A 785
GLU A 676
ARG A 353
None
1.03A 2jn3A-1ogyA:
undetectable
2jn3A-1ogyA:
10.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD2_A_CHDA2_0
(FERROCHELATASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 MET A 189
LEU A 381
SER A 216
VAL A 212
None
None
MGD  A1804 (-2.3A)
None
1.00A 2qd2A-1ogyA:
0.3
2qd2A-1ogyA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD4_B_CHDB928_0
(FERROCHELATASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 LEU A 569
PHE A 570
GLN A 453
LEU A 401
PRO A 402
None
1.22A 2qd4B-1ogyA:
undetectable
2qd4B-1ogyA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD5_A_CHDA701_0
(FERROCHELATASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 MET A 189
LEU A 381
SER A 216
VAL A 212
None
None
MGD  A1804 (-2.3A)
None
0.99A 2qd5A-1ogyA:
1.7
2qd5A-1ogyA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD5_A_CHDA702_0
(FERROCHELATASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 LEU A 497
PRO A 498
ARG A 542
None
0.63A 2qd5A-1ogyA:
undetectable
2qd5A-1ogyA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD5_B_CHDB1103_0
(FERROCHELATASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 MET A 189
LEU A 381
SER A 216
VAL A 212
None
None
MGD  A1804 (-2.3A)
None
0.97A 2qd5B-1ogyA:
1.8
2qd5B-1ogyA:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WSC_A_PQNA1802_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.92A 2wscA-1ogyA:
0.0
2wscA-1ogyA:
22.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WSE_A_PQNA1801_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.91A 2wseA-1ogyA:
0.0
2wseA-1ogyA:
22.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WSF_A_PQNA1802_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.91A 2wsfA-1ogyA:
0.0
2wsfA-1ogyA:
22.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X1L_B_ADNB601_1
(METHIONYL-TRNA
SYNTHETASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 ALA A 433
ALA A 435
GLY A 120
GLY A 117
ILE A 447
None
1.00A 2x1lB-1ogyA:
undetectable
2x1lB-1ogyA:
23.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X1L_C_ADNC601_1
(METHIONYL-TRNA
SYNTHETASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 11 ALA A 433
ALA A 435
GLY A 120
GLY A 117
ILE A 447
None
1.02A 2x1lC-1ogyA:
undetectable
2x1lC-1ogyA:
23.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_C_SAMC604_1
(HYPOTHETICAL PROTEIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 4 GLY A 657
GLU A 646
ASP A 649
TYR A 661
None
1.47A 2yvlC-1ogyA:
2.2
2yvlC-1ogyA:
17.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G89_A_SAMA303_0
(RIBOSOMAL RNA SMALL
SUBUNIT
METHYLTRANSFERASE G)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
6 / 12 PHE A 119
ASP A 483
ALA A 484
ARG A  69
ALA A 500
GLU A 504
None
MGD  A1803 (-2.9A)
MGD  A1803 ( 4.2A)
None
None
None
1.49A 3g89A-1ogyA:
3.2
3g89A-1ogyA:
16.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KP2_A_PNNA5001_0
(TRANSCRIPTIONAL
REGULATOR TCAR)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 ASN A 358
LEU A 364
SER A 342
ASN A 349
None
1.09A 3kp2A-1ogyA:
0.0
3kp2B-1ogyA:
0.0
3kp2A-1ogyA:
10.70
3kp2B-1ogyA:
10.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LCV_B_SAMB301_0
(SISOMICIN-GENTAMICIN
RESISTANCE METHYLASE
SGM)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 SER A 574
ALA A 608
ASP A 617
LEU A 618
LEU A 603
None
1.34A 3lcvB-1ogyA:
2.1
3lcvB-1ogyA:
16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LW5_A_PQNA5001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.90A 3lw5A-1ogyA:
0.0
3lw5A-1ogyA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N62_B_ACTB860_0
(NITRIC OXIDE
SYNTHASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLY A 293
TRP A 356
VAL A 355
None
0.64A 3n62B-1ogyA:
undetectable
3n62B-1ogyA:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N65_B_ACTB860_0
(NITRIC OXIDE
SYNTHASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLY A 293
TRP A 356
VAL A 355
None
0.61A 3n65B-1ogyA:
undetectable
3n65B-1ogyA:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N66_B_ACTB860_0
(NITRIC OXIDE
SYNTHASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLY A 293
TRP A 356
VAL A 355
None
0.66A 3n66B-1ogyA:
undetectable
3n66B-1ogyA:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OND_A_ADNA506_2
(ADENOSYLHOMOCYSTEINA
SE)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLN B 105
THR B 106
LEU A 706
None
0.63A 3ondA-1ogyB:
undetectable
3ondA-1ogyB:
14.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OND_B_ADNB507_2
(ADENOSYLHOMOCYSTEINA
SE)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLN B 105
THR B 106
LEU A 706
None
0.64A 3ondB-1ogyB:
undetectable
3ondB-1ogyB:
14.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXC_A_ROCA401_2
(PROTEASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 ARG A 730
LEU A 732
THR A 753
None
0.88A 3oxcA-1ogyA:
undetectable
3oxcA-1ogyA:
8.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PCQ_A_PQNA847_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.06A 3pcqA-1ogyA:
undetectable
3pcqA-1ogyA:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TYE_B_YTZB902_1
(DIHYDROPTEROATE
SYNTHASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 PHE A 595
LYS A 541
SER A 540
None
1.23A 3tyeB-1ogyA:
undetectable
3tyeB-1ogyA:
17.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_A_SAMA501_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 120
ASN A 457
ALA A 132
PHE A 397
LEU A 145
None
0.85A 3vywA-1ogyA:
2.4
3vywA-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_A_SAMA501_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 120
GLY A 122
ALA A 132
PHE A 397
LEU A 145
None
1.03A 3vywA-1ogyA:
2.4
3vywA-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_B_SAMB401_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 120
GLY A 122
ALA A 132
PHE A 397
LEU A 145
None
1.01A 3vywB-1ogyA:
undetectable
3vywB-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_B_SAMB401_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
6 / 12 HIS A 151
GLY A 120
ASN A 457
ALA A 132
PHE A 397
LEU A 145
MGD  A1803 ( 4.8A)
None
None
None
None
None
0.81A 3vywB-1ogyA:
undetectable
3vywB-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_C_SAMC401_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
6 / 12 HIS A 151
GLY A 120
ASN A 457
ALA A 132
PHE A 397
LEU A 145
MGD  A1803 ( 4.8A)
None
None
None
None
None
0.83A 3vywC-1ogyA:
2.3
3vywC-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_D_SAMD401_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 120
GLY A 122
ALA A 132
PHE A 397
LEU A 145
None
1.05A 3vywD-1ogyA:
1.5
3vywD-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_D_SAMD401_0
(MNMC2)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
6 / 12 HIS A 151
GLY A 120
ASN A 457
ALA A 132
PHE A 397
LEU A 145
MGD  A1803 ( 4.8A)
None
None
None
None
None
0.80A 3vywD-1ogyA:
1.5
3vywD-1ogyA:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E7C_C_ACTC506_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 ARG A  33
ILE A  12
TRP A  14
GLY A  31
None
1.40A 4e7cC-1ogyA:
0.0
4e7cC-1ogyA:
20.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FE1_A_PQNA846_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 10 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.06A 4fe1A-1ogyA:
1.3
4fe1J-1ogyA:
0.0
4fe1A-1ogyA:
21.33
4fe1J-1ogyA:
4.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IJI_F_BEZF501_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN YIBF)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 ASN A 358
ALA A 156
SER A 155
ARG A 392
None
1.13A 4ijiF-1ogyA:
0.7
4ijiF-1ogyA:
14.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IJI_H_BEZH501_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN YIBF)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 ASN A 358
ALA A 156
SER A 155
ARG A 392
None
1.14A 4ijiH-1ogyA:
0.8
4ijiH-1ogyA:
14.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L6V_1_PQN12001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
FUSION PROTEIN OF
PHOTOSYSTEM I
SUBUNIT III AND
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 11 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.05A 4l6v1-1ogyA:
undetectable
4l6v6-1ogyA:
0.0
4l6v1-1ogyA:
22.54
4l6v6-1ogyA:
9.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L6V_A_PQNA2001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
FUSION PROTEIN OF
PHOTOSYSTEM I
SUBUNIT III AND
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.07A 4l6va-1ogyA:
undetectable
4l6vf-1ogyA:
0.0
4l6va-1ogyA:
22.54
4l6vf-1ogyA:
9.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RKU_A_PQNA5001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 PHE A 140
SER A 142
ALA A 132
LEU A 135
None
0.95A 4rkuA-1ogyA:
0.0
4rkuJ-1ogyA:
0.0
4rkuA-1ogyA:
22.44
4rkuJ-1ogyA:
5.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WNU_A_QDNA602_1
(CYTOCHROME P450 2D6)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 11 GLY A 602
LEU A 603
GLU A 606
PHE A 597
ALA A 571
None
1.08A 4wnuA-1ogyA:
undetectable
4wnuA-1ogyA:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WQ4_B_ACTB403_0
(TRNA N6-ADENOSINE
THREONYLCARBAMOYLTRA
NSFERASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 ARG A  50
ASP A  43
ARG A 628
None
0.62A 4wq4B-1ogyA:
1.8
4wq4B-1ogyA:
18.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XK8_A_PQNA844_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 7 PHE A 140
SER A 142
ALA A 132
LEU A 135
None
0.99A 4xk8A-1ogyA:
undetectable
4xk8A-1ogyA:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XK8_A_PQNA845_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 8 SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.92A 4xk8a-1ogyA:
undetectable
4xk8a-1ogyA:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y28_A_PQNA5001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.00A 4y28A-1ogyA:
undetectable
4y28J-1ogyA:
0.0
4y28A-1ogyA:
22.65
4y28J-1ogyA:
5.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CXV_A_0HKA501_2
(MUSCARINIC
ACETYLCHOLINE
RECEPTOR
M1,ENDOLYSIN,MUSCARI
NIC ACETYLCHOLINE
RECEPTOR M1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 THR A 545
THR A 544
PHE A 566
None
0.91A 5cxvA-1ogyA:
undetectable
5cxvA-1ogyA:
19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_P_BEZP801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 SER A 222
ALA A 190
HIS A 220
LEU A 184
None
None
MGD  A1804 (-4.4A)
None
1.42A 5dzkb-1ogyA:
undetectable
5dzkp-1ogyA:
undetectable
5dzkb-1ogyA:
14.45
5dzkp-1ogyA:
2.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_P_BEZP801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 SER A 222
HIS A 220
MET A 192
LEU A 184
None
MGD  A1804 (-4.4A)
MGD  A1804 (-3.7A)
None
1.49A 5dzkb-1ogyA:
undetectable
5dzkp-1ogyA:
undetectable
5dzkb-1ogyA:
14.45
5dzkp-1ogyA:
2.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_Q_BEZQ801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 SER A 222
ALA A 190
HIS A 220
LEU A 184
None
None
MGD  A1804 (-4.4A)
None
1.42A 5dzkc-1ogyA:
undetectable
5dzkq-1ogyA:
undetectable
5dzkc-1ogyA:
14.45
5dzkq-1ogyA:
2.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWZ_D_010D6_0
(N-[(5-METHYLISOXAZOL
-3-YL)CARBONYL]ALANY
L-L-VALYL-N~1~-((1R,
2Z)-4-(BENZYLOXY)-4-
OXO-1-{[(3R)-2-OXOPY
RROLIDIN-3-YL]METHYL
}BUT-2-ENYL)-L-LEUCI
NAMIDE
PEDV MAIN PROTEASE)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 MET A 405
HIS A 415
GLY A 611
None
0.73A 5gwzB-1ogyA:
0.4
5gwzB-1ogyA:
16.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IY5_P_CHDP307_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 LEU A 569
PHE A 566
LEU A 135
PHE A 140
None
1.16A 5iy5P-1ogyA:
undetectable
5iy5W-1ogyA:
0.0
5iy5P-1ogyA:
14.59
5iy5W-1ogyA:
6.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L8R_A_PQNA844_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 9 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
1.05A 5l8rA-1ogyA:
2.4
5l8rA-1ogyA:
21.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MRA_B_DM2B204_1
(SORCIN)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE

(Rhodobacter
sphaeroides)
4 / 6 THR B  78
ARG B  95
ASP B  82
GLY B  85
None
HEC  B1129 (-4.2A)
None
None
1.21A 5mraA-1ogyB:
undetectable
5mraB-1ogyB:
undetectable
5mraA-1ogyB:
22.47
5mraB-1ogyB:
22.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OY0_1_PQN1842_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
PHOTOSYSTEM I
REACTION CENTER
SUBUNIT IX)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 10 PHE A 140
SER A 142
ALA A 132
LEU A 135
GLY A 139
None
0.98A 5oy01-1ogyA:
undetectable
5oy07-1ogyA:
0.0
5oy01-1ogyA:
7.49
5oy07-1ogyA:
5.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_A_ACTA305_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 THR A 753
MET A 759
HIS A 723
None
0.75A 5uunA-1ogyA:
0.8
5uunA-1ogyA:
17.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_B_ACTB307_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 LEU A 306
ALA A 305
LEU A 267
None
0.53A 5uunB-1ogyA:
undetectable
5uunB-1ogyA:
17.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_A_PCFA1801_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 6 ILE A 240
ILE A 670
HIS A 246
PHE A 258
None
1.08A 5vkqA-1ogyA:
0.0
5vkqB-1ogyA:
0.0
5vkqA-1ogyA:
19.69
5vkqB-1ogyA:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_D_PCFD1807_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 6 PHE A 258
ILE A 240
ILE A 670
HIS A 246
None
1.06A 5vkqA-1ogyA:
0.0
5vkqD-1ogyA:
0.0
5vkqA-1ogyA:
19.69
5vkqD-1ogyA:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VLM_G_CVIG301_0
(REGULATORY PROTEIN
TETR)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 MET A 100
GLN A 103
ALA A 104
GLU A 476
ILE A 479
None
1.28A 5vlmG-1ogyA:
0.0
5vlmG-1ogyA:
13.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VUO_B_ACTB804_0
(NITRIC OXIDE
SYNTHASE, BRAIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLY A 293
TRP A 356
VAL A 355
None
0.62A 5vuoB-1ogyA:
undetectable
5vuoB-1ogyA:
20.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X1F_C_CHDC304_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 LEU A 569
PHE A 566
LEU A 135
PHE A 140
None
1.15A 5x1fC-1ogyA:
undetectable
5x1fJ-1ogyA:
0.0
5x1fC-1ogyA:
15.37
5x1fJ-1ogyA:
6.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDX_C_CHDC308_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT VIIA-HEART)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 LEU A 569
PHE A 566
LEU A 135
PHE A 140
None
1.14A 5xdxC-1ogyA:
undetectable
5xdxJ-1ogyA:
0.0
5xdxC-1ogyA:
14.77
5xdxJ-1ogyA:
6.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDX_P_CHDP306_0
(CYTOCHROME C OXIDASE
SUBUNIT 3
CYTOCHROME C OXIDASE
SUBUNIT VIIA-HEART)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
4 / 5 LEU A 569
PHE A 566
LEU A 135
PHE A 140
None
1.19A 5xdxP-1ogyA:
0.0
5xdxW-1ogyA:
undetectable
5xdxP-1ogyA:
14.77
5xdxW-1ogyA:
6.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B58_A_ACTA608_0
(FUMARATE REDUCTASE
FLAVOPROTEIN SUBUNIT)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
3 / 3 GLY A 562
THR A 564
GLU A 567
None
0.62A 6b58A-1ogyA:
undetectable
6b58A-1ogyA:
21.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BRD_C_RFPC502_1
(RIFAMPIN
MONOOXYGENASE)
1ogy DIHEME CYTOCHROME C
NAPB MOLECULE:
NITRATE REDUCTASE
PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 VAL A 627
ARG B  83
PHE A 379
THR A  24
GLY A  25
None
None
None
SF4  A1801 ( 4.2A)
SF4  A1801 ( 4.3A)
1.10A 6brdC-1ogyA:
undetectable
6brdC-1ogyA:
8.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECT_A_SAMA1300_0
(STIE PROTEIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 275
ASP A 781
ILE A 786
SER A 155
GLU A 437
None
0.93A 6ectA-1ogyA:
2.5
6ectA-1ogyA:
17.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECX_A_SAMA1301_0
(STIE PROTEIN)
1ogy PERIPLASMIC NITRATE
REDUCTASE

(Rhodobacter
sphaeroides)
5 / 12 GLY A 275
ASP A 781
ILE A 786
SER A 155
GLU A 437
None
1.00A 6ecxA-1ogyA:
2.6
6ecxA-1ogyA:
18.12