SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1pkq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1USQ_F_CLMF1144_0
(DR HEMAGGLUTININ
STRUCTURAL SUBUNIT)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 7 GLY B  53
PRO B  52
THR B  57
ILE B  51
GLY B  55
None
1.41A 1usqF-1pkqB:
undetectable
1usqF-1pkqB:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQY_A_ADNA400_1
(MEMBRANE LIPOPROTEIN
TMPC)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 ASP B  86
PHE B  63
MET B  80
PHE B  69
GLY B  65
None
1.25A 2fqyA-1pkqB:
undetectable
2fqyA-1pkqB:
20.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JKJ_E_CLME1141_0
(DR HEMAGGLUTININ
STRUCTURAL SUBUNIT)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 7 GLY B  53
PRO B  52
THR B  57
ILE B  51
GLY B  55
None
1.40A 2jkjE-1pkqB:
undetectable
2jkjE-1pkqB:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JKL_E_CLME1143_0
(DR HEMAGGLUTININ
STRUCTURAL SUBUNIT)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 7 GLY B  53
PRO B  52
THR B  57
ILE B  51
GLY B  55
None
1.41A 2jklE-1pkqB:
undetectable
2jklE-1pkqB:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HUO_A_PNNA302_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
4 / 6 LEU B 189
GLY B 190
ALA B 125
PRO B 126
None
0.50A 3huoA-1pkqB:
undetectable
3huoA-1pkqB:
22.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4COX_C_IMNC701_1
(CYCLOOXYGENASE-2)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 LEU B  82
SER B  17
VAL B  12
GLY B  10
ALA B   9
None
1.10A 4coxC-1pkqB:
undetectable
4coxC-1pkqB:
18.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JX1_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 10 PHE B 122
GLY B 118
THR B 205
VAL B 198
VAL B 207
None
1.20A 4jx1B-1pkqB:
undetectable
4jx1B-1pkqB:
20.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVN_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.89A 4qvnH-1pkqB:
undetectable
4qvnI-1pkqB:
undetectable
4qvnH-1pkqB:
20.74
4qvnI-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVN_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 10 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.89A 4qvnV-1pkqB:
undetectable
4qvnW-1pkqB:
0.2
4qvnV-1pkqB:
20.74
4qvnW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVP_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.86A 4qvpH-1pkqB:
undetectable
4qvpI-1pkqB:
undetectable
4qvpH-1pkqB:
20.74
4qvpI-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVP_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.86A 4qvpV-1pkqB:
undetectable
4qvpW-1pkqB:
undetectable
4qvpV-1pkqB:
20.74
4qvpW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 4qvqH-1pkqB:
undetectable
4qvqI-1pkqB:
undetectable
4qvqH-1pkqB:
20.74
4qvqI-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVQ_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 4qvqV-1pkqB:
undetectable
4qvqW-1pkqB:
undetectable
4qvqV-1pkqB:
20.74
4qvqW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVV_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.93A 4qvvH-1pkqB:
undetectable
4qvvH-1pkqB:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVV_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.92A 4qvvV-1pkqB:
undetectable
4qvvV-1pkqB:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVY_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.93A 4qvyH-1pkqB:
undetectable
4qvyH-1pkqB:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVY_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.93A 4qvyV-1pkqB:
undetectable
4qvyW-1pkqB:
undetectable
4qvyV-1pkqB:
20.74
4qvyW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW0_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.91A 4qw0H-1pkqB:
undetectable
4qw0I-1pkqB:
undetectable
4qw0H-1pkqB:
20.74
4qw0I-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW0_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.91A 4qw0V-1pkqB:
undetectable
4qw0W-1pkqB:
undetectable
4qw0V-1pkqB:
20.74
4qw0W-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW1_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.90A 4qw1H-1pkqB:
undetectable
4qw1I-1pkqB:
undetectable
4qw1H-1pkqB:
20.74
4qw1I-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QW1_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.89A 4qw1V-1pkqB:
undetectable
4qw1W-1pkqB:
undetectable
4qw1V-1pkqB:
20.74
4qw1W-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWU_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.90A 4qwuH-1pkqB:
undetectable
4qwuI-1pkqB:
0.5
4qwuH-1pkqB:
20.74
4qwuI-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWU_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.90A 4qwuV-1pkqB:
undetectable
4qwuW-1pkqB:
undetectable
4qwuV-1pkqB:
20.74
4qwuW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CZ7_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.91A 5cz7V-1pkqB:
undetectable
5cz7W-1pkqB:
undetectable
5cz7V-1pkqB:
20.74
5cz7W-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5D0X_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 11 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.91A 5d0xV-1pkqB:
undetectable
5d0xV-1pkqB:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L5F_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 5l5fH-1pkqB:
undetectable
5l5fI-1pkqB:
undetectable
5l5fH-1pkqB:
20.74
5l5fI-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L5F_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 5l5fV-1pkqB:
undetectable
5l5fW-1pkqB:
undetectable
5l5fV-1pkqB:
20.74
5l5fW-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L66_H_BO2H301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 5l66H-1pkqB:
undetectable
5l66I-1pkqB:
undetectable
5l66H-1pkqB:
20.74
5l66I-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L66_V_BO2V301_1
(PROTEASOME SUBUNIT
BETA TYPE-2
PROTEASOME SUBUNIT
BETA TYPE-3)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
5 / 12 SER B 188
GLY B 134
THR B 135
ALA B 136
THR B 131
None
0.88A 5l66V-1pkqB:
undetectable
5l66W-1pkqB:
undetectable
5l66V-1pkqB:
20.74
5l66W-1pkqB:
24.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EQP_A_BUWA601_1
(CHOLINESTERASE)
1pkq (8-18C5) CHIMERIC
FAB, HEAVY CHAIN

(Mus
musculus)
4 / 8 GLY B  10
THR B 108
PHE B 146
TYR B 176
None
0.94A 6eqpA-1pkqB:
undetectable
6eqpA-1pkqB:
15.48