SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1q0u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RA8_A_FOLA161_0
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ALA A 151
THR A  78
ARG A 136
ILE A 174
THR A 150
 None
 0.99A 1ra8A-1q0uA:
undetectable		 1ra8A-1q0uA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BR4_D_SAMD301_1
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		3 / 3 LYS A 201
ASP A 139
ASP A 172
 None
 0.99A 2br4D-1q0uA:
2.8		 2br4D-1q0uA:
18.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4N_A_TPVA300_2
(PROTEASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		4 / 8 LEU A 146
GLY A 112
ILE A 111
LEU A 123
 None
 0.60A 2o4nB-1q0uA:
undetectable		 2o4nB-1q0uA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CD2_A_MTXA307_1
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ILE A  30
SER A 188
PRO A 206
LEU A 185
ILE A  34
 None
 1.13A 3cd2A-1q0uA:
undetectable		 3cd2A-1q0uA:
22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUD_C_SUEC1201_1
(NS3 PROTEASE, NS4A
PROTEIN)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 GLY A 166
ILE A 111
GLY A 135
ALA A  79
ALA A  85
 None
 0.96A 3sudC-1q0uA:
undetectable		 3sudC-1q0uA:
22.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_B_SUEB1201_1
(NS3 PROTEASE, NS4A
PROTEIN)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 GLY A 166
ILE A 111
GLY A 135
ALA A  79
ALA A  85
 None
 1.01A 3sufB-1q0uA:
undetectable		 3sufB-1q0uA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_D_SUED1201_1
(NS3 PROTEASE, NS4A
PROTEIN)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 GLY A 166
ILE A 111
GLY A 135
ALA A  79
ALA A  85
 None
 1.01A 3sufD-1q0uA:
undetectable		 3sufD-1q0uA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UM5_A_CP6A609_1
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 10 ILE A 153
VAL A  73
THR A  92
ILE A  88
ILE A  62
 None
 1.18A 3um5A-1q0uA:
undetectable		 3um5A-1q0uA:
16.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UM5_B_CP6B709_1
(BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 10 ILE A 153
VAL A  73
THR A  92
ILE A  88
ILE A  62
 None
 1.21A 3um5B-1q0uA:
undetectable		 3um5B-1q0uA:
16.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AFT_D_QMRD301_1
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		4 / 8 VAL A  76
TYR A  58
VAL A  73
ILE A 153
 None
 1.15A 4aftD-1q0uA:
undetectable
4aftE-1q0uA:
undetectable		 4aftD-1q0uA:
23.08
4aftE-1q0uA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4CD2_A_FOLA207_0
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ILE A  15
ILE A  62
LYS A  65
LEU A  39
THR A  96
 None
 1.16A 4cd2A-1q0uA:
undetectable		 4cd2A-1q0uA:
22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O2B_B_LOCB503_2
(TUBULIN BETA-2B
CHAIN)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 LEU A 185
ALA A  38
ALA A  75
ILE A  77
ILE A 129
 None
 1.02A 4o2bB-1q0uA:
undetectable		 4o2bB-1q0uA:
20.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QN9_B_DXCB610_0
(N-ACYL-PHOSPHATIDYLE
THANOLAMINE-HYDROLYZ
ING PHOSPHOLIPASE D)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		3 / 3 GLY A 135
PRO A 134
ALA A  79
 None
 0.45A 4qn9B-1q0uA:
1.0		 4qn9B-1q0uA:
19.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YOA_A_017A100_1
(HIV-1 PROTEASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		4 / 6 ASP A 147
PRO A 134
THR A  78
VAL A  76
 None
 1.04A 4yoaA-1q0uA:
0.0		 4yoaA-1q0uA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E8Q_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ALA A 151
THR A  78
ARG A 136
ILE A 174
THR A 150
 None
 0.93A 5e8qA-1q0uA:
undetectable		 5e8qA-1q0uA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EAJ_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ALA A 151
THR A  78
ARG A 136
ILE A 174
THR A 150
 None
 0.90A 5eajA-1q0uA:
undetectable		 5eajA-1q0uA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EB3_A_UEGA202_1
(YFIR)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		4 / 4 LEU A 163
ILE A 168
PRO A 197
LEU A 199
 None
 0.94A 5eb3A-1q0uA:
2.4		 5eb3A-1q0uA:
23.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HP1_A_PPFA602_1
(HIV-1 REVERSE
TRANSCRIPTASE P66
SUBUNIT)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		4 / 6 ARG A 142
ASP A 170
GLY A 135
ASP A 139
 None
 1.29A 5hp1A-1q0uA:
undetectable		 5hp1A-1q0uA:
16.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MIO_B_LOCB502_1
(TUBULIN BETA CHAIN)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 LEU A 185
ALA A  38
ALA A  75
ILE A  77
ILE A 129
 None
 1.03A 5mioB-1q0uA:
undetectable		 5mioB-1q0uA:
20.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UJX_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 ALA A 151
THR A  78
ARG A 136
ILE A 174
THR A 150
 None
 0.90A 5ujxA-1q0uA:
undetectable		 5ujxA-1q0uA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C2M_D_SUED1202_0
(NS3 PROTEASE)		 1q0u BSTDEAD
(Geobacillus
stearothermophil
us) 		5 / 12 GLY A 166
ILE A 111
GLY A 135
ALA A  79
ALA A  85
 None
 1.03A 6c2mD-1q0uA:
undetectable		 6c2mD-1q0uA:
19.21