SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1q5n'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_C_DVAC6_0
(GRAMICIDIN A)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 ALA A 215
VAL A 190
TRP A 227
None
0.86A 1gmkC-1q5nA:
undetectable
1gmkD-1q5nA:
undetectable
1gmkC-1q5nA:
4.14
1gmkD-1q5nA:
4.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_A_VDYA1002_4
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 5 LEU A 376
VAL A 389
ALA A 396
CYH A 393
None
1.00A 1mz9D-1q5nA:
0.5
1mz9D-1q5nA:
6.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_D_VDYD1001_3
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 THR A 335
LEU A 339
LEU A 346
None
0.66A 1mz9C-1q5nA:
undetectable
1mz9C-1q5nA:
6.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P7L_C_SAMC685_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1p7lD-1q5nA:
0.1
1p7lD-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P7L_C_SAMC885_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1p7lC-1q5nA:
0.0
1p7lC-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_A_SAMA385_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1rg9B-1q5nA:
0.0
1rg9B-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_B_SAMB485_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1rg9A-1q5nA:
undetectable
1rg9A-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_C_SAMC585_1
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1rg9D-1q5nA:
undetectable
1rg9D-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG9_C_SAMC685_0
(S-ADENOSYLMETHIONINE
SYNTHETASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 1rg9C-1q5nA:
undetectable
1rg9C-1q5nA:
23.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_E_MK1E902_2
(POL POLYPROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 ASP A 405
ILE A 425
VAL A 388
None
0.58A 2avvD-1q5nA:
undetectable
2avvD-1q5nA:
14.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXG_A_IBPA2001_1
(SERUM ALBUMIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 11 LEU A 241
VAL A 248
GLY A 249
ALA A 338
LEU A 339
None
1.16A 2bxgA-1q5nA:
2.2
2bxgA-1q5nA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIN_P_CHDP1271_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 3)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 6 ARG A 120
LEU A 117
GLN A 118
LEU A 218
None
1.12A 2einP-1q5nA:
3.9
2einW-1q5nA:
undetectable
2einP-1q5nA:
18.58
2einW-1q5nA:
9.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X9G_A_LYAA1270_2
(PTERIDINE REDUCTASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 MET A 374
VAL A 410
GLU A 390
None
0.89A 2x9gA-1q5nA:
undetectable
2x9gA-1q5nA:
22.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YQZ_A_SAMA301_0
(HYPOTHETICAL PROTEIN
TTHA0223)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 12 GLY A 249
GLY A 246
ALA A 295
ARG A 341
LEU A 339
None
0.97A 2yqzA-1q5nA:
undetectable
2yqzA-1q5nA:
23.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_B_SAMB400_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 9 ALA A 295
VAL A 299
GLY A 249
GLY A 246
ALA A 338
None
0.96A 2z0yB-1q5nA:
undetectable
2z0yB-1q5nA:
21.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AX7_A_SALA1336_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 SER A  47
THR A  50
VAL A  51
ALA A  35
None
0.94A 3ax7A-1q5nA:
undetectable
3ax7A-1q5nA:
15.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AX9_A_SALA1341_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 SER A  47
THR A  50
VAL A  51
ALA A  35
None
0.95A 3ax9A-1q5nA:
undetectable
3ax9A-1q5nA:
15.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ME6_C_CGEC501_1
(CYTOCHROME P450 2B4)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
6 / 9 VAL A 372
PHE A 426
ALA A 396
THR A 395
VAL A 410
VAL A 388
None
1.47A 3me6C-1q5nA:
undetectable
3me6C-1q5nA:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ME6_D_CGED501_1
(CYTOCHROME P450 2B4)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 9 VAL A 372
PHE A 426
ALA A 396
VAL A 410
VAL A 388
None
1.27A 3me6D-1q5nA:
1.5
3me6D-1q5nA:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHN_A_ACTA108_0
(PROTEIN P-30)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 THR A 106
SER A 107
ARG A 316
None
0.70A 3phnA-1q5nA:
undetectable
3phnA-1q5nA:
12.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3T3S_A_9PLA1_1
(CYTOCHROME P450 2A13)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 9 PHE A 426
ALA A 369
ALA A 392
THR A 395
LEU A 366
None
1.41A 3t3sA-1q5nA:
0.0
3t3sA-1q5nA:
20.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W68_C_VIVC301_0
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 12 VAL A 130
ILE A 116
ILE A 237
VAL A 240
LEU A 241
None
0.88A 3w68C-1q5nA:
undetectable
3w68C-1q5nA:
20.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W68_D_VIVD301_0
(ALPHA-TOCOPHEROL
TRANSFER PROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 12 VAL A 130
ILE A 116
ILE A 237
VAL A 240
LEU A 241
None
0.88A 3w68D-1q5nA:
undetectable
3w68D-1q5nA:
20.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4H1N_A_CGEA505_1
(CYTOCHROME P450 2B4)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
5 / 11 PHE A  18
ILE A 237
ALA A 122
THR A 335
ILE A 244
None
1.20A 4h1nA-1q5nA:
0.3
4h1nA-1q5nA:
20.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IG1_A_ACTA504_0
(FAD:PROTEIN FMN
TRANSFERASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 5 SER A 256
ARG A 253
LEU A 257
ASP A 254
None
1.40A 4ig1A-1q5nA:
0.0
4ig1A-1q5nA:
23.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KTT_A_SAMA405_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.61A 4kttB-1q5nA:
undetectable
4kttB-1q5nA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KTT_C_SAMC404_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.64A 4kttD-1q5nA:
undetectable
4kttD-1q5nA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_A_SAMA407_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.66A 4ndnB-1q5nA:
undetectable
4ndnB-1q5nA:
22.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_C_SAMC405_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.62A 4ndnD-1q5nA:
undetectable
4ndnD-1q5nA:
22.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GWX_A_SAMA301_1
(GLYCINE SARCOSINE
N-METHYLTRANSFERASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
3 / 3 ARG A 176
ASN A 247
ASP A 254
None
0.88A 5gwxA-1q5nA:
undetectable
5gwxA-1q5nA:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HRQ_A_IPHA101_0
(INSULIN A-CHAIN
INSULIN B-CHAIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 5 CYH A 393
HIS A 364
LEU A 366
HIS A 402
None
1.12A 5hrqA-1q5nA:
undetectable
5hrqB-1q5nA:
undetectable
5hrqF-1q5nA:
undetectable
5hrqA-1q5nA:
4.28
5hrqB-1q5nA:
7.32
5hrqF-1q5nA:
7.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HRQ_E_IPHE101_0
(INSULIN A-CHAIN
INSULIN B-CHAIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 7 CYH A 393
ILE A 406
HIS A 364
LEU A 366
None
0.93A 5hrqE-1q5nA:
undetectable
5hrqF-1q5nA:
undetectable
5hrqJ-1q5nA:
undetectable
5hrqE-1q5nA:
4.28
5hrqF-1q5nA:
7.32
5hrqJ-1q5nA:
7.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HRQ_K_IPHK101_0
(INSULIN A-CHAIN
INSULIN B-CHAIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 6 HIS A 402
CYH A 393
HIS A 364
LEU A 366
None
1.16A 5hrqH-1q5nA:
undetectable
5hrqK-1q5nA:
undetectable
5hrqL-1q5nA:
undetectable
5hrqH-1q5nA:
7.32
5hrqK-1q5nA:
4.28
5hrqL-1q5nA:
7.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MVM_A_PFLA511_1
(PROTON-GATED ION
CHANNEL)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 ILE A  52
ALA A  97
ALA A  39
ILE A  44
None
0.76A 5mvmA-1q5nA:
3.5
5mvmB-1q5nA:
3.4
5mvmA-1q5nA:
10.31
5mvmB-1q5nA:
10.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5T8S_B_SAMB402_0
(S-ADENOSYLMETHIONINE
SYNTHASE)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 8 GLN A 127
ASP A 177
ILE A 181
ILE A 184
None
0.72A 5t8sA-1q5nA:
undetectable
5t8sA-1q5nA:
22.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_B_PCFB1806_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 6 ILE A 181
ILE A 306
LEU A 328
PHE A 332
None
0.83A 5vkqB-1q5nA:
undetectable
5vkqC-1q5nA:
undetectable
5vkqB-1q5nA:
13.62
5vkqC-1q5nA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_C_PCFC1807_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 6 ILE A 181
ILE A 306
LEU A 328
PHE A 332
None
0.83A 5vkqC-1q5nA:
undetectable
5vkqD-1q5nA:
undetectable
5vkqC-1q5nA:
13.62
5vkqD-1q5nA:
13.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MVX_A_K4DA1304_0
(ION TRANSPORT
PROTEIN)
1q5n 3-CARBOXY-CIS,CIS-MU
CONATE
CYCLOISOMERASE

(Acinetobacter
calcoaceticus)
4 / 6 THR A 335
LEU A 334
MET A 303
LEU A 293
None
1.21A 6mvxA-1q5nA:
undetectable
6mvxB-1q5nA:
1.4
6mvxC-1q5nA:
1.8
6mvxA-1q5nA:
21.35
6mvxB-1q5nA:
21.35
6mvxC-1q5nA:
21.35