SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1qdd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A  51
TRP A  35
 None
 1.28A 1c4dC-1qddA:
undetectable
1c4dD-1qddA:
undetectable		 1c4dC-1qddA:
17.54
1c4dD-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HWI_C_115C4_1
(HMG-COA REDUCTASE)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		4 / 7 VAL A 116
SER A 117
ASN A  75
ASP A 134
 None
 1.32A 1hwiC-1qddA:
0.0		 1hwiC-1qddA:
15.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HWI_D_115D3_2
(HMG-COA REDUCTASE)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		4 / 7 VAL A 116
SER A 117
ASN A  75
ASP A 134
 None
 1.32A 1hwiD-1qddA:
0.0		 1hwiD-1qddA:
15.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 VAL A 139
TRP A  35
TRP A  77
 None
 1.18A 2xdcA-1qddA:
undetectable
2xdcB-1qddA:
undetectable		 2xdcA-1qddA:
17.54
2xdcB-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 1.20A 2xdcA-1qddA:
undetectable
2xdcB-1qddA:
undetectable		 2xdcA-1qddA:
17.54
2xdcB-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_C_DVAC8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 VAL A 139
TRP A  35
TRP A  77
 None
 1.20A 2xdcC-1qddA:
undetectable
2xdcD-1qddA:
undetectable		 2xdcC-1qddA:
17.54
2xdcD-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_D_DVAD8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 0.97A 2xdcC-1qddA:
undetectable
2xdcD-1qddA:
undetectable		 2xdcC-1qddA:
17.54
2xdcD-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_F_DVAF8_0
(GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 0.99A 2xdcE-1qddA:
undetectable
2xdcF-1qddA:
undetectable		 2xdcE-1qddA:
17.54
2xdcF-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 VAL A 139
TRP A  35
TRP A  77
 None
 1.17A 2y5mA-1qddA:
undetectable
2y5mB-1qddA:
undetectable		 2y5mA-1qddA:
17.54
2y5mB-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_F_DVAF8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 0.97A 2y5mE-1qddA:
undetectable
2y5mF-1qddA:
undetectable		 2y5mE-1qddA:
17.54
2y5mF-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 VAL A 139
TRP A  35
TRP A  77
 None
 1.17A 2y6nA-1qddA:
undetectable
2y6nB-1qddA:
undetectable		 2y6nA-1qddA:
17.54
2y6nB-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 1.18A 2y6nA-1qddA:
undetectable
2y6nB-1qddA:
undetectable		 2y6nA-1qddA:
17.54
2y6nB-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_D_DVAD8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 0.95A 2y6nC-1qddA:
undetectable
2y6nD-1qddA:
undetectable		 2y6nC-1qddA:
17.54
2y6nD-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_F_DVAF8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A 139
TRP A  35
 None
 0.95A 2y6nE-1qddA:
undetectable
2y6nF-1qddA:
undetectable		 2y6nE-1qddA:
17.54
2y6nF-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 VAL A 139
TRP A  35
TRP A  77
 None
 1.14A 3zq8A-1qddA:
undetectable
3zq8B-1qddA:
undetectable		 3zq8A-1qddA:
17.54
3zq8B-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_D_DVAD8_0
(VAL-GRAMICIDIN A)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		3 / 3 TRP A  77
VAL A  51
TRP A  35
 None
 0.93A 3zq8C-1qddA:
undetectable
3zq8D-1qddA:
undetectable		 3zq8C-1qddA:
17.54
3zq8D-1qddA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4USW_A_ACTA1470_0
(ADENYLATE CYCLASE
TYPE 10)		 1qdd LITHOSTATHINE
(Homo
sapiens) 		4 / 6 LEU A 118
LEU A  65
VAL A  62
PHE A  28
 None
 1.18A 4uswA-1qddA:
undetectable		 4uswA-1qddA:
13.93