SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1qma'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RU9_H_ACTH611_0
(IMMUNOGLOBULIN
IGG2A, HEAVY CHAIN
IMMUNOGLOBULIN
IGG2A, LIGHT CHAIN)
1qma NUCLEAR TRANSPORT
FACTOR 2

(Rattus
norvegicus)
4 / 6 LEU A  39
TRP A  41
LEU A  59
PHE A  22
None
1.10A 1ru9H-1qmaA:
undetectable
1ru9L-1qmaA:
undetectable
1ru9H-1qmaA:
16.74
1ru9L-1qmaA:
19.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RUK_L_ACTL611_0
(IMMUNOGLOBULIN
IGG2A, HEAVY CHAIN
IMMUNOGLOBULIN
IGG2A, LIGHT CHAIN)
1qma NUCLEAR TRANSPORT
FACTOR 2

(Rattus
norvegicus)
4 / 6 LEU A  39
TRP A  41
LEU A  59
PHE A  22
None
1.15A 1rukH-1qmaA:
undetectable
1rukL-1qmaA:
undetectable
1rukH-1qmaA:
16.74
1rukL-1qmaA:
19.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NOA_A_3TCA302_1
(DEOXYCYTIDINE KINASE)
1qma NUCLEAR TRANSPORT
FACTOR 2

(Rattus
norvegicus)
5 / 12 ILE A  64
TRP A  41
LEU A 121
PHE A 119
GLN A 101
None
1.46A 2noaA-1qmaA:
undetectable
2noaA-1qmaA:
17.84