SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1rfy'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ZLQ_A_ACTA1507_0
(NICKEL-BINDING
PERIPLASMIC PROTEIN)		 1rfy TRANSCRIPTIONAL
REPRESSOR TRAM
(Agrobacterium
tumefaciens) 		3 / 3 GLN A  82
HIS A  40
ARG A  41
 None
 1.02A 1zlqA-1rfyA:
undetectable		 1zlqA-1rfyA:
13.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HCR_A_CHDA4_0
(FERROCHELATASE,
MITOCHONDRIAL)		 1rfy TRANSCRIPTIONAL
REPRESSOR TRAM
(Agrobacterium
tumefaciens) 		3 / 3 LEU A  17
PRO A  16
LEU A  20
 None
 0.54A 3hcrA-1rfyA:
undetectable		 3hcrA-1rfyA:
19.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZVG_B_SAMB401_0
(389AA LONG
HYPOTHETICAL
NUCLEOLAR PROTEIN)		 1rfy TRANSCRIPTIONAL
REPRESSOR TRAM
(Agrobacterium
tumefaciens) 		5 / 12 LYS A  10
ASP A  35
ALA A  36
ARG A  38
PRO A  97
 None
 1.30A 5zvgB-1rfyA:
undetectable		 5zvgB-1rfyA:
14.29