SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1sed'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TT6_A_DESA129_1
(TRANSTHYRETIN)		 1sed HYPOTHETICAL PROTEIN
YHAI
(Bacillus
subtilis) 		4 / 4 LYS A  70
LEU A  74
LEU A  53
SER A  54
 MPD  A 714 ( 2.5A)
MPD  A 712 ( 4.9A)
None
None
 1.30A 1tt6A-1sedA:
undetectable		 1tt6A-1sedA:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DRJ_A_RAPA201_2
(PEPTIDYL-PROLYL
CIS-TRANS ISOMERASE
FKBP4
SERINE/THREONINE-PRO
TEIN KINASE MTOR)		 1sed HYPOTHETICAL PROTEIN
YHAI
(Bacillus
subtilis) 		4 / 8 LEU A  53
THR A  67
ASP A  69
PHE A  75
 None
 1.05A 4drjB-1sedA:
1.9		 4drjB-1sedA:
27.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TE8_C_08JC602_1
(CYTOCHROME P450 3A4)		 1sed HYPOTHETICAL PROTEIN
YHAI
(Bacillus
subtilis) 		4 / 7 LEU A  72
ALA A  76
ILE A  49
LEU A  53
 MPD  A 702 ( 4.8A)
MPD  A 703 (-4.4A)
None
None
 0.97A 5te8C-1sedA:
undetectable		 5te8C-1sedA:
16.67