SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1shs'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SDU_B_MK1B902_1
(PROTEASE RETROPEPSIN)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 11 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.96A 1sduA-1shsA:
undetectable		 1sduA-1shsA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T3R_A_017A1200_2
(PROTEASE RETROPEPSIN)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 11 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.91A 1t3rB-1shsA:
undetectable		 1t3rB-1shsA:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_A_MK1A901_1
(POL POLYPROTEIN)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 12 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.81A 2avvA-1shsA:
undetectable		 2avvA-1shsA:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DQE_B_017B101_1
(ASPARTYL PROTEASE)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 11 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.98A 4dqeA-1shsA:
undetectable		 4dqeA-1shsA:
19.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DQF_B_017B101_1
(ASPARTYL PROTEASE)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 12 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.95A 4dqfA-1shsA:
undetectable		 4dqfA-1shsA:
19.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DQH_B_017B101_1
(WILD-TYPE HIV-1
PROTEASE DIMER)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 11 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.93A 4dqhA-1shsA:
undetectable		 4dqhA-1shsA:
19.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FGZ_A_CQAA302_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		4 / 7 GLU A 102
GLU A 104
GLY A  62
ARG A  83
 None
 0.84A 4fgzA-1shsA:
undetectable		 4fgzA-1shsA:
24.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Q1X_A_017A101_2
(ASPARTYL PROTEASE)		 1shs SMALL HEAT SHOCK
PROTEIN
(Methanocaldococc
us
jannaschii) 		5 / 12 LEU A 133
ALA A 113
GLY A  34
VAL A  56
ILE A  54
 None
 0.89A 4q1xB-1shsA:
undetectable		 4q1xB-1shsA:
21.09