SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1squ'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HSH_C_MK1C402_2
(HIV-II PROTEASE)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		5 / 8 ALA A 101
GLY A  50
ILE A  52
ILE A  46
ILE A 113
 None
 1.39A 1hshD-1squA:
undetectable		 1hshD-1squA:
26.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8X_B_NIMB1701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		5 / 12 LEU A  56
ILE A 113
GLY A  98
ALA A 101
LEU A 104
 None
 1.12A 3n8xB-1squA:
undetectable		 3n8xB-1squA:
14.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8Y_A_DIFA701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		5 / 11 LEU A  56
ILE A 113
GLY A  98
ALA A 101
LEU A 104
 None
 1.08A 3n8yA-1squA:
undetectable		 3n8yA-1squA:
14.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SFE_C_TMGC1_1
(SUCCINATE
DEHYDROGENASE
[UBIQUINONE]
IRON-SULFUR SUBUNIT,
MITOCHONDRIAL
SUCCINATE
DEHYDROGENASE
CYTOCHROME B560
SUBUNIT,
MITOCHONDRIAL)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		4 / 8 HIS A  35
ILE A 132
SER A 128
ILE A 126
 None
 1.06A 3sfeB-1squA:
undetectable
3sfeC-1squA:
undetectable		 3sfeB-1squA:
21.48
3sfeC-1squA:
26.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZJL_A_ERYA1101_0
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		5 / 12 SER A  61
PHE A 140
LEU A  21
THR A  96
GLY A  93
 None
 1.34A 4zjlA-1squA:
undetectable		 4zjlA-1squA:
10.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NUJ_A_Z80A201_1
(BETA-LACTOGLOBULIN)		 1squ CHEX PROTEIN
(Thermotoga
maritima) 		4 / 8 ALA A  65
VAL A  68
LEU A  21
ILE A 137
 None
 0.84A 5nujA-1squA:
0.0		 5nujA-1squA:
20.74