SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1swf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HSH_C_MK1C402_2
(HIV-II PROTEASE)		 1swf CIRCULARLY PERMUTED
CORE-STREPTAVIDIN
E51/A46
(Streptomyces
avidinii) 		5 / 8 ALA A  33
GLY A  41
ILE A  30
ILE A 104
ILE A  17
 None
 1.38A 1hshD-1swfA:
undetectable		 1hshD-1swfA:
25.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2UZ2_A_ACTA1123_0
(XENAVIDIN)		 1swf CIRCULARLY PERMUTED
CORE-STREPTAVIDIN
E51/A46
(Streptomyces
avidinii) 		5 / 7 ASN A  23
LEU A  25
SER A  27
TYR A  43
TRP A  92
 None
 0.38A 2uz2A-1swfA:
undetectable		 2uz2A-1swfA:
20.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SI7_A_ACTA4_0
(CYSTIC FIBROSIS
TRANSMEMBRANE
CONDUCTANCE
REGULATOR)		 1swf CIRCULARLY PERMUTED
CORE-STREPTAVIDIN
E51/A46
(Streptomyces
avidinii) 		4 / 4 LEU A  73
GLY A  74
GLY A  94
THR A 106
 None
 0.89A 3si7A-1swfA:
undetectable		 3si7A-1swfA:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C71_B_NCTB501_1
(AMINE OXIDASE)		 1swf CIRCULARLY PERMUTED
CORE-STREPTAVIDIN
E51/A46
(Streptomyces
avidinii) 		4 / 8 TYR A  43
TRP A  79
THR A  90
ASN A  23
 None
 1.24A 6c71B-1swfA:
undetectable		 6c71B-1swfA:
24.22