SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1szh'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ACL_G_REAG501_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 1szh HER-1 PROTEIN
(Caenorhabditis
elegans) 		5 / 12 ILE A  25
ALA A  28
ALA A  29
ILE A  44
LEU A  73
 None
 0.98A 2aclG-1szhA:
undetectable		 2aclG-1szhA:
21.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D9L_A_ACTA501_0
(CTD-PEPTIDE
RNA-BINDING PROTEIN
16)		 1szh HER-1 PROTEIN
(Caenorhabditis
elegans) 		4 / 5 PRO A  50
ILE A  51
PRO A 115
TYR A  66
 None
 1.21A 3d9lA-1szhA:
undetectable
3d9lY-1szhA:
undetectable		 3d9lA-1szhA:
21.26
3d9lY-1szhA:
8.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LSF_H_PZIH800_0
(GLUTAMATE RECEPTOR 2)		 1szh HER-1 PROTEIN
(Caenorhabditis
elegans) 		4 / 8 TYR A 137
LEU A 123
ASP A 124
LYS A 127
 None
 0.86A 3lsfH-1szhA:
undetectable		 3lsfH-1szhA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LSL_A_PZIA800_0
(GLUTAMATE RECEPTOR 2)		 1szh HER-1 PROTEIN
(Caenorhabditis
elegans) 		4 / 7 TYR A 137
LEU A 123
ASP A 124
LYS A 127
 None
 0.92A 3lslA-1szhA:
undetectable
3lslD-1szhA:
undetectable		 3lslA-1szhA:
20.96
3lslD-1szhA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LSL_D_PZID800_0
(GLUTAMATE RECEPTOR 2)		 1szh HER-1 PROTEIN
(Caenorhabditis
elegans) 		4 / 7 TYR A 137
LEU A 123
ASP A 124
LYS A 127
 None
 0.94A 3lslA-1szhA:
undetectable
3lslD-1szhA:
undetectable		 3lslA-1szhA:
20.96
3lslD-1szhA:
20.96