SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1u9l'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KW4_A_TICA600_1
(CYTOCHROME P450 2B4)
1u9l TRANSCRIPTION
ELONGATION PROTEIN
NUSA

(Escherichia
coli)
5 / 11 ILE A 365
ILE A 395
PHE A 369
ALA A 370
GLY A 377
None
0.96A 3kw4A-1u9lA:
undetectable
3kw4A-1u9lA:
9.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5H4D_A_BBIA403_1
(NAD-DEPENDENT
PROTEIN DEACETYLASE
SIRTUIN-3,
MITOCHONDRIAL)
1u9l TRANSCRIPTION
ELONGATION PROTEIN
NUSA

(Escherichia
coli)
4 / 6 PHE A 369
GLU A 376
GLU A 383
VAL A 387
None
1.41A 5h4dA-1u9lA:
undetectable
5h4dA-1u9lA:
15.69