SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1umr'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 242
TRP C 225
None
1.22A 1c4dC-1umrC:
undetectable
1c4dD-1umrC:
undetectable
1c4dC-1umrC:
10.19
1c4dD-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_D_DVAD8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.34A 1c4dC-1umrC:
undetectable
1c4dD-1umrC:
undetectable
1c4dC-1umrC:
10.19
1c4dD-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 225
TRP C 267
None
1.07A 2xdcA-1umrC:
undetectable
2xdcB-1umrC:
undetectable
2xdcA-1umrC:
10.19
2xdcB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_A_DVAA8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 267
TRP C 225
None
1.37A 2xdcA-1umrC:
undetectable
2xdcB-1umrC:
undetectable
2xdcA-1umrC:
10.19
2xdcB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 225
VAL C 320
TRP C 267
None
1.37A 2xdcA-1umrC:
undetectable
2xdcB-1umrC:
undetectable
2xdcA-1umrC:
10.19
2xdcB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_B_DVAB8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.09A 2xdcA-1umrC:
undetectable
2xdcB-1umrC:
undetectable
2xdcA-1umrC:
10.19
2xdcB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_C_DVAC8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 225
TRP C 267
None
1.13A 2xdcC-1umrC:
undetectable
2xdcD-1umrC:
undetectable
2xdcC-1umrC:
10.19
2xdcD-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_D_DVAD8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.03A 2xdcC-1umrC:
undetectable
2xdcD-1umrC:
undetectable
2xdcC-1umrC:
10.19
2xdcD-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XDC_F_DVAF8_0
(GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.06A 2xdcE-1umrC:
undetectable
2xdcF-1umrC:
undetectable
2xdcE-1umrC:
10.19
2xdcF-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 225
TRP C 267
None
1.06A 2y5mA-1umrC:
undetectable
2y5mB-1umrC:
undetectable
2y5mA-1umrC:
10.19
2y5mB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_A_DVAA8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 267
TRP C 225
None
1.36A 2y5mA-1umrC:
undetectable
2y5mB-1umrC:
undetectable
2y5mA-1umrC:
10.19
2y5mB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y5M_F_DVAF8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.03A 2y5mE-1umrC:
undetectable
2y5mF-1umrC:
undetectable
2y5mE-1umrC:
10.19
2y5mF-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 225
TRP C 267
None
1.06A 2y6nA-1umrC:
undetectable
2y6nB-1umrC:
undetectable
2y6nA-1umrC:
10.19
2y6nB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_A_DVAA8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 267
TRP C 225
None
1.37A 2y6nA-1umrC:
undetectable
2y6nB-1umrC:
undetectable
2y6nA-1umrC:
10.19
2y6nB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 225
VAL C 320
TRP C 267
None
1.36A 2y6nA-1umrC:
undetectable
2y6nB-1umrC:
undetectable
2y6nA-1umrC:
10.19
2y6nB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_B_DVAB8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.07A 2y6nA-1umrC:
undetectable
2y6nB-1umrC:
undetectable
2y6nA-1umrC:
10.19
2y6nB-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_D_DVAD8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.01A 2y6nC-1umrC:
undetectable
2y6nD-1umrC:
undetectable
2y6nC-1umrC:
10.19
2y6nD-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y6N_F_DVAF8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 320
TRP C 225
None
1.01A 2y6nE-1umrC:
undetectable
2y6nF-1umrC:
undetectable
2y6nE-1umrC:
10.19
2y6nF-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 VAL C 320
TRP C 225
TRP C 267
None
1.06A 3zq8A-1umrC:
undetectable
3zq8B-1umrC:
undetectable
3zq8A-1umrC:
10.19
3zq8B-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_D_DVAD8_0
(VAL-GRAMICIDIN A)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 TRP C 267
VAL C 242
TRP C 225
None
0.97A 3zq8C-1umrC:
undetectable
3zq8D-1umrC:
undetectable
3zq8C-1umrC:
10.19
3zq8D-1umrC:
10.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AN2_A_EUIA1382_2
(DUAL SPECIFICITY
MITOGEN-ACTIVATED
PROTEIN KINASE
KINASE 1)
1umr CONVULXIN BETA
(Crotalus
durissus)
4 / 4 ASN C 306
SER C 310
LEU C 309
THR C 247
None
1.45A 4an2A-1umrC:
undetectable
4an2A-1umrC:
15.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KTV_A_ADNA403_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1umr CONVULXIN ALPHA
(Crotalus
durissus)
5 / 12 HIS A  14
LYS A 130
ASP A  12
ASP A  51
ILE A  44
None
1.48A 4ktvA-1umrA:
0.0
4ktvB-1umrA:
0.0
4ktvA-1umrA:
15.21
4ktvB-1umrA:
15.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KTV_C_ADNC403_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
1umr CONVULXIN ALPHA
(Crotalus
durissus)
5 / 11 HIS A  14
LYS A 130
ASP A  12
ASP A  51
ILE A  44
None
1.35A 4ktvC-1umrA:
undetectable
4ktvD-1umrA:
undetectable
4ktvC-1umrA:
15.21
4ktvD-1umrA:
15.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZZB_E_ACTE403_0
(PROTON-GATED ION
CHANNEL)
1umr CONVULXIN ALPHA
CONVULXIN BETA

(Crotalus
durissus;
Crotalus
durissus)
3 / 3 ARG A 114
TYR C 289
GLU C 291
None
0.71A 4zzbE-1umrA:
undetectable
4zzbE-1umrA:
19.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_I_Z80I401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
1umr CONVULXIN BETA
(Crotalus
durissus)
4 / 9 ILE C 268
VAL C 254
THR C 257
TRP C 267
None
0.82A 5lg3I-1umrC:
undetectable
5lg3I-1umrC:
16.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TRQ_B_ACTB306_0
(WELO5)
1umr CONVULXIN BETA
(Crotalus
durissus)
3 / 3 GLU C 324
ARG C 213
TYR C 214
None
0.64A 5trqB-1umrC:
undetectable
5trqB-1umrC:
17.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CNJ_D_NCTD402_1
(NEURONAL
ACETYLCHOLINE
RECEPTOR SUBUNIT
ALPHA-4
NEURONAL
ACETYLCHOLINE
RECEPTOR SUBUNIT
BETA-2)
1umr CONVULXIN ALPHA
CONVULXIN BETA

(Crotalus
durissus)
4 / 8 TRP C 281
THR C 285
TRP A 116
LEU A  72
None
1.37A 6cnjD-1umrC:
undetectable
6cnjE-1umrC:
undetectable
6cnjD-1umrC:
23.26
6cnjE-1umrC:
19.35