SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1v87'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_F_SVRF509_2
(PHOSPHOLIPASE A2)		 1v87 DELTEX PROTEIN 2
(Mus
musculus) 		4 / 8 TYR A  74
ASN A  78
LYS A  79
TRP A 101
 None
 1.25A 3bjwD-1v87A:
undetectable		 3bjwD-1v87A:
19.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SPK_B_TPVB100_1
(HIV-1 PROTEASE)		 1v87 DELTEX PROTEIN 2
(Mus
musculus) 		5 / 9 LEU A  70
VAL A  12
GLY A  93
ILE A  91
THR A  17
 None
 1.25A 3spkA-1v87A:
undetectable		 3spkA-1v87A:
18.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MK4_A_CHDA503_0
(FERROCHELATASE,
MITOCHONDRIAL)		 1v87 DELTEX PROTEIN 2
(Mus
musculus) 		5 / 10 LEU A  67
LEU A  70
LEU A  83
ARG A  14
THR A  90
 None
 1.35A 4mk4A-1v87A:
undetectable		 4mk4A-1v87A:
17.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NCS_A_ACTA303_0
(N-ACETYLNEURAMINIC
ACID (SIALIC ACID)
SYNTHETASE)		 1v87 DELTEX PROTEIN 2
(Mus
musculus) 		3 / 3 ILE A  91
THR A  90
PRO A 100
 None
 0.54A 6ncsA-1v87A:
undetectable		 6ncsA-1v87A:
17.95