SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1vim'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)	View	Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2RHM_B_BEZB194_0 (PUTATIVE KINASE)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	4 / 5	PRO A 72 ILE A 74 ARG A 35 ASP A 78	None	1.41A	2rhmB-1vimA: 2.6	2rhmB-1vimA: 21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2RHM_B_BEZB194_0 (PUTATIVE KINASE)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	4 / 5	PRO A 72 ILE A 74 ARG A 73 ASP A 78	None	1.22A	2rhmB-1vimA: 2.6	2rhmB-1vimA: 21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2RHM_D_BEZD194_0 (PUTATIVE KINASE)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	4 / 5	PRO A 72 ILE A 74 ARG A 35 ASP A 78	None	1.46A	2rhmD-1vimA: 2.5	2rhmD-1vimA: 21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2RHM_D_BEZD194_0 (PUTATIVE KINASE)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	4 / 5	PRO A 72 ILE A 74 ARG A 73 ASP A 78	None	1.24A	2rhmD-1vimA: 2.5	2rhmD-1vimA: 21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4QYN_A_RTLA201_0 (RETINOL-BINDING PROTEIN 2)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	5 / 12	PHE A 149 ILE A 48 THR A 23 VAL A 24 LEU A 157	None	1.16A	4qynA-1vimA: undetectable	4qynA-1vimA: 24.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4QZU_A_RTLA201_0 (RETINOL-BINDING PROTEIN 2)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	5 / 12	PHE A 149 ILE A 48 THR A 23 VAL A 24 LEU A 157	None	1.21A	4qzuA-1vimA: undetectable	4qzuA-1vimA: 24.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4WH5_A_3QBA204_1 (LINCOSAMIDE RESISTANCE PROTEIN)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	5 / 12	GLY A 103 ASP A 76 ASP A 78 PHE A 38 ILE A 74	None	1.38A	4wh5A-1vimA: undetectable	4wh5A-1vimA: 20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5HW8_F_FK5F201_1 (FK506-BINDING PROTEIN 1)	1vim	HYPOTHETICAL PROTEIN AF1796 (Archaeoglobus fulgidus)	5 / 12	PHE A 156 VAL A 24 ILE A 28 ILE A 37 ILE A 83	None	1.00A	5hw8B-1vimA: undetectable 5hw8F-1vimA: undetectable 5hw8G-1vimA: undetectable	5hw8B-1vimA: 21.00 5hw8F-1vimA: 21.00 5hw8G-1vimA: 21.00

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["2RHM_B_BEZB194_0","PUTATIVE KINASE","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",4,"PRO A  72;ILE A  74;ARG A  35;ASP A  78","None","1.41A","2rhmB-1vimA:2.6","2rhmB-1vimA:21.05"],["2RHM_B_BEZB194_0","PUTATIVE KINASE","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",4,"PRO A  72;ILE A  74;ARG A  73;ASP A  78","None","1.22A","2rhmB-1vimA:2.6","2rhmB-1vimA:21.05"],["2RHM_D_BEZD194_0","PUTATIVE KINASE","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",4,"PRO A  72;ILE A  74;ARG A  35;ASP A  78","None","1.46A","2rhmD-1vimA:2.5","2rhmD-1vimA:21.05"],["2RHM_D_BEZD194_0","PUTATIVE KINASE","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",4,"PRO A  72;ILE A  74;ARG A  73;ASP A  78","None","1.24A","2rhmD-1vimA:2.5","2rhmD-1vimA:21.05"],["4QYN_A_RTLA201_0","RETINOL-BINDING PROTEIN 2","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",5,"PHE A 149;ILE A  48;THR A  23;VAL A  24;LEU A 157","None","1.16A","4qynA-1vimA:undetectable","4qynA-1vimA:24.38"],["4QZU_A_RTLA201_0","RETINOL-BINDING PROTEIN 2","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",5,"PHE A 149;ILE A  48;THR A  23;VAL A  24;LEU A 157","None","1.21A","4qzuA-1vimA:undetectable","4qzuA-1vimA:24.38"],["4WH5_A_3QBA204_1","LINCOSAMIDE RESISTANCE PROTEIN","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",5,"GLY A 103;ASP A  76;ASP A  78;PHE A  38;ILE A  74","None","1.38A","4wh5A-1vimA:undetectable","4wh5A-1vimA:20.19"],["5HW8_F_FK5F201_1","FK506-BINDING PROTEIN 1;FK506-BINDING PROTEIN 1;FK506-BINDING PROTEIN 1","1vim","HYPOTHETICAL PROTEIN AF1796","Archaeoglobus fulgidus",5,"PHE A 156;VAL A  24;ILE A  28;ILE A  37;ILE A  83","None","1.00A","5hw8B-1vimA:undetectable;5hw8F-1vimA:undetectable;5hw8G-1vimA:undetectable","5hw8B-1vimA:21.00;5hw8F-1vimA:21.00;5hw8G-1vimA:21.00"]]