SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1vke'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_A_VDYA1002_2
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)		 1vke CARBOXYMUCONOLACTONE
DECARBOXYLASE FAMILY
PROTEIN
(Thermotoga
maritima) 		3 / 3 ILE A  96
LEU A  99
VAL A 103
 None
 0.19A 1mz9B-1vkeA:
undetectable		 1mz9B-1vkeA:
25.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_B_SUEB1201_3
(NS3 PROTEASE, NS4A
PROTEIN)		 1vke CARBOXYMUCONOLACTONE
DECARBOXYLASE FAMILY
PROTEIN
(Thermotoga
maritima) 		4 / 5 SER A  33
ARG A  37
PRO A  38
VAL A  43
 None
 1.03A 3sufC-1vkeA:
undetectable		 3sufC-1vkeA:
23.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y2T_A_8LXA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 1vke CARBOXYMUCONOLACTONE
DECARBOXYLASE FAMILY
PROTEIN
(Thermotoga
maritima) 		3 / 3 SER A  54
HIS A  66
TYR A  36
 UNL  A 123 ( 3.8A)
UNL  A 123 (-4.3A)
UNL  A 123 (-4.4A)
 1.02A 5y2tA-1vkeA:
undetectable		 5y2tA-1vkeA:
undetectable