SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1vki'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_D_ASDD1224_1
(GLUTATHIONE
S-TRANSFERASE A3)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		5 / 9 LEU A  16
LEU A 151
ALA A 157
LEU A 155
ALA A 111
 None
 1.13A 2vcvD-1vkiA:
undetectable		 2vcvD-1vkiA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_H_ASDH1224_1
(GLUTATHIONE
S-TRANSFERASE A3)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		5 / 9 LEU A  16
LEU A 151
ALA A 157
LEU A 155
ALA A 111
 None
 1.15A 2vcvH-1vkiA:
undetectable		 2vcvH-1vkiA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VCV_I_ASDI1224_1
(GLUTATHIONE
S-TRANSFERASE A3)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		5 / 9 LEU A  16
LEU A 151
ALA A 157
LEU A 155
ALA A 111
 None
 1.12A 2vcvI-1vkiA:
undetectable		 2vcvI-1vkiA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_B_TFPB202_1
(PROTEIN S100-A4)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		3 / 3 GLU A  67
LEU A 127
ASP A 126
 None
 0.35A 3ko0A-1vkiA:
undetectable		 3ko0A-1vkiA:
18.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_S_TFPS202_2
(PROTEIN S100-A4)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		3 / 3 GLU A  67
LEU A 127
ASP A 126
 None
 0.40A 3ko0T-1vkiA:
undetectable		 3ko0T-1vkiA:
18.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UQ6_A_ADNA401_2
(ADENOSINE KINASE,
PUTATIVE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		4 / 5 LEU A 138
ALA A 111
PHE A 154
ASN A  51
 None
 1.46A 3uq6A-1vkiA:
undetectable		 3uq6A-1vkiA:
19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VAQ_A_ADNA401_2
(PUTATIVE ADENOSINE
KINASE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		4 / 4 LEU A 138
ALA A 111
PHE A 154
ASN A  51
 None
 1.49A 3vaqA-1vkiA:
undetectable		 3vaqA-1vkiA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VAS_A_ADNA401_2
(PUTATIVE ADENOSINE
KINASE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		4 / 4 LEU A 138
ALA A 111
PHE A 154
ASN A  51
 None
 1.47A 3vasA-1vkiA:
undetectable		 3vasA-1vkiA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WXO_A_NIZA804_1
(CATALASE-PEROXIDASE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		3 / 3 ASN A  69
GLU A  67
ARG A  41
 None
 0.93A 3wxoA-1vkiA:
undetectable		 3wxoA-1vkiA:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XDR_A_ADNA402_1
(FAD:PROTEIN FMN
TRANSFERASE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		5 / 12 PHE A 154
VAL A  63
GLY A 110
PRO A 162
THR A 158
 None
 0.99A 4xdrA-1vkiA:
undetectable		 4xdrA-1vkiA:
18.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BYK_A_OAQA302_0
(SULFOTRANSFERASE)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		5 / 12 ILE A  21
VAL A 108
LEU A  19
THR A 144
THR A 158
 None
 1.17A 5bykA-1vkiA:
undetectable		 5bykA-1vkiA:
23.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NZX_A_9F2A1102_1
(DNA CROSS-LINK
REPAIR 1A PROTEIN)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		4 / 8 PHE A  15
THR A 107
ILE A 112
GLY A 110
 None
 0.93A 5nzxA-1vkiA:
0.5		 5nzxA-1vkiA:
18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NZY_A_CE3A1102_1
(DNA CROSS-LINK
REPAIR 1A PROTEIN)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		4 / 7 PHE A  15
THR A 107
ILE A 112
GLY A 110
 None
 0.98A 5nzyA-1vkiA:
0.9		 5nzyA-1vkiA:
18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6D8F_A_ACTA803_0
(UNCHARACTERIZED
PROTEIN)		 1vki HYPOTHETICAL PROTEIN
ATU3699
(Agrobacterium
fabrum) 		3 / 3 GLU A  36
LEU A  40
ARG A  41
 None
 0.77A 6d8fA-1vkiA:
undetectable		 6d8fA-1vkiA:
15.69