SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1vtl'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KYV_C_RBFC503_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)		 1vtl TATA BINDING PROTEIN
(TBP)
(Arabidopsis
thaliana) 		5 / 12 ILE E 160
LEU E 162
GLY E 120
SER E 121
ILE E 170
 None
 1.17A 1kyvB-1vtlE:
undetectable
1kyvC-1vtlE:
undetectable		 1kyvB-1vtlE:
21.13
1kyvC-1vtlE:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EM0_B_CHDB500_0
(ILEAL BILE
ACID-BINDING PROTEIN)		 1vtl TATA BINDING PROTEIN
(TBP)
(Arabidopsis
thaliana) 		4 / 7 THR E  70
VAL E  80
THR E  82
VAL E  29
 None
 0.32A 3em0B-1vtlE:
undetectable		 3em0B-1vtlE:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IB1_A_IMNA701_1
(LACTOTRANSFERRIN)		 1vtl TATA BINDING PROTEIN
(TBP)
(Arabidopsis
thaliana) 		4 / 4 PRO E  23
THR E  24
GLY E  83
THR E  82
 None
 1.11A 3ib1A-1vtlE:
undetectable		 3ib1A-1vtlE:
21.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4TVT_A_ASCA303_0
(THAUMATIN-1)		 1vtl TATA BINDING PROTEIN
(TBP)
(Arabidopsis
thaliana) 		4 / 7 GLU E 186
SER E  19
ILE E  21
VAL E 124
 None
 1.20A 4tvtA-1vtlE:
undetectable		 4tvtA-1vtlE:
22.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0R_A_PX9A201_0
(BETA-LACTOGLOBULIN)		 1vtl TATA BINDING PROTEIN
(TBP)
(Arabidopsis
thaliana) 		5 / 12 ILE E 128
LEU E 133
ILE E 164
ILE E 170
VAL E 124
 None
 0.81A 4y0rA-1vtlE:
3.5		 4y0rA-1vtlE:
23.59