SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1whm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_A_MK1A901_2
(POL POLYPROTEIN)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		3 / 3 ASP A  48
VAL A  45
PRO A   8
 None
 0.78A 2avvA-1whmA:
undetectable		 2avvA-1whmA:
22.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_A_FUNA201_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 MET A  49
SER A  17
ILE A  24
VAL A  20
ILE A  53
 None
 0.95A 3rf4A-1whmA:
undetectable
3rf4C-1whmA:
undetectable		 3rf4A-1whmA:
18.92
3rf4C-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_A_FUNA201_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 MET A  49
SER A  26
ILE A  24
VAL A  20
ILE A  53
 None
 1.28A 3rf4A-1whmA:
undetectable
3rf4C-1whmA:
undetectable		 3rf4A-1whmA:
18.92
3rf4C-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_B_FUNB202_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 ILE A  53
MET A  49
SER A  17
ILE A  24
VAL A  20
 None
 0.95A 3rf4A-1whmA:
undetectable
3rf4B-1whmA:
undetectable		 3rf4A-1whmA:
18.92
3rf4B-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_B_FUNB202_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 ILE A  53
MET A  49
SER A  26
ILE A  24
VAL A  20
 None
 1.32A 3rf4A-1whmA:
undetectable
3rf4B-1whmA:
undetectable		 3rf4A-1whmA:
18.92
3rf4B-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_C_FUNC203_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 ILE A  53
MET A  49
SER A  17
ILE A  24
VAL A  20
 None
 0.95A 3rf4B-1whmA:
undetectable
3rf4C-1whmA:
undetectable		 3rf4B-1whmA:
18.92
3rf4C-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_C_FUNC203_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		5 / 11 ILE A  53
MET A  49
SER A  26
ILE A  24
VAL A  20
 None
 1.32A 3rf4B-1whmA:
undetectable
3rf4C-1whmA:
undetectable		 3rf4B-1whmA:
18.92
3rf4C-1whmA:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JEC_B_478B401_3
(HIV-1 PROTEASE)		 1whm CYLINDROMATOSIS
TUMOR SUPPRESSOR
CYLD
(Homo
sapiens) 		3 / 3 ASP A  61
LEU A  65
VAL A  71
 None
 0.68A 4jecB-1whmA:
undetectable		 4jecB-1whmA:
24.27