SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1xdi'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SS4_A_ACTA411_0
(GLYOXALASE FAMILY
PROTEIN)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 5 VAL A 352
THR A 351
GLN A 435
ILE A 334
 None
 0.86A 1ss4A-1xdiA:
0.7		 1ss4A-1xdiA:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UWH_B_BAXB1723_2
(B-RAF PROTO-ONCOGENE
SERINE/THREONINE-PRO
TEIN KINASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 6 VAL A   6
ILE A 312
ILE A 131
ASP A 146
 None
 0.75A 1uwhB-1xdiA:
undetectable		 1uwhB-1xdiA:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A1M_A_CAMA1422_0
(CYTOCHROME P450-CAM)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 7 THR A  58
VAL A 206
GLY A 205
ASP A 199
 None
 0.92A 2a1mA-1xdiA:
undetectable		 2a1mA-1xdiA:
23.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A1O_B_CAMB2422_0
(CYTOCHROME P450-CAM)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 9 THR A  58
LEU A 204
VAL A 206
GLY A 205
ASP A 199
 None
 1.13A 2a1oB-1xdiA:
undetectable		 2a1oB-1xdiA:
23.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYU_B_SAMB201_0
(PUTATIVE RIBOSOMAL
RNA
METHYLTRANSFERASE 2)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A  10
ALA A 151
GLY A 153
LEU A 149
LEU A 105
 FAD  A 999 (-4.8A)
None
FAD  A 999 (-3.3A)
None
None
 1.06A 2nyuB-1xdiA:
4.3		 2nyuB-1xdiA:
18.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 8 GLN A 435
VAL A 413
GLY A 366
GLY A 416
 None
 0.74A 2vinA-1xdiA:
undetectable		 2vinA-1xdiA:
18.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YQZ_B_SAMB401_0
(HYPOTHETICAL PROTEIN
TTHA0223)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A  14
GLY A  11
ALA A 329
LEU A  19
VAL A  20
 None
FAD  A 999 (-3.3A)
None
None
None
 0.91A 2yqzB-1xdiA:
4.0		 2yqzB-1xdiA:
23.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_A_SAMA601_0
(HYPOTHETICAL PROTEIN)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 THR A 252
GLY A 268
GLY A 255
ALA A 271
VAL A 266
 None
 0.96A 2yvlA-1xdiA:
4.1		 2yvlA-1xdiA:
18.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_B_SAMB602_0
(HYPOTHETICAL PROTEIN)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 THR A 252
GLY A 268
GLY A 255
ALA A 271
VAL A 266
 None
 0.95A 2yvlB-1xdiA:
4.2		 2yvlB-1xdiA:
18.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z97_A_CAMA422_0
(CYTOCHROME P450-CAM)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 6 LEU A 257
VAL A 249
VAL A 211
VAL A 188
 None
 0.84A 2z97A-1xdiA:
undetectable		 2z97A-1xdiA:
23.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FAL_A_REAA501_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 10 ALA A 461
ALA A 460
ALA A 444
VAL A 365
ILE A 427
 None
 1.06A 3falA-1xdiA:
undetectable		 3falA-1xdiA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3H52_A_486A3_1
(GLUCOCORTICOID
RECEPTOR)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A 415
VAL A 413
ARG A 348
LEU A 428
ILE A 457
 None
 1.34A 3h52A-1xdiA:
undetectable		 3h52A-1xdiA:
17.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SO9_A_017A100_1
(HIV-1 PROTEASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 8 GLY A 115
ASP A  37
GLY A  10
ILE A   7
THR A 102
 None
FAD  A 999 (-3.5A)
FAD  A 999 (-4.8A)
None
None
 1.38A 3so9A-1xdiA:
undetectable		 3so9A-1xdiA:
12.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SO9_A_017A100_2
(HIV-1 PROTEASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 ALA A 433
VAL A 440
ILE A 404
GLY A 415
THR A 410
 None
 0.95A 3so9B-1xdiA:
undetectable		 3so9B-1xdiA:
12.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HTF_B_SAMB301_0
(S-ADENOSYLMETHIONINE
-DEPENDENT
METHYLTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		6 / 12 GLY A  10
GLY A  11
GLY A  41
SER A  98
VAL A  33
VAL A 110
 FAD  A 999 (-4.8A)
FAD  A 999 (-3.3A)
FAD  A 999 (-3.1A)
None
None
None
 1.46A 4htfB-1xdiA:
3.5		 4htfB-1xdiA:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QTU_D_SAMD301_0
(PUTATIVE
METHYLTRANSFERASE
BUD23)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A  10
GLY A  38
ILE A 101
SER A  98
ILE A  34
 FAD  A 999 (-4.8A)
None
None
None
None
 1.07A 4qtuD-1xdiA:
3.7		 4qtuD-1xdiA:
18.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UCK_B_SAMB2409_1
(RNA-DIRECTED RNA
POLYMERASE L)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 6 SER A 155
GLY A  41
ASP A  47
ASP A  37
 None
FAD  A 999 (-3.1A)
FAD  A 999 (-3.8A)
FAD  A 999 (-3.5A)
 1.03A 4uckB-1xdiA:
2.4		 4uckB-1xdiA:
21.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UDA_A_DEXA1985_2
(MINERALOCORTICOID
RECEPTOR)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 6 LEU A 240
LEU A 229
THR A 202
VAL A 208
 None
 1.04A 4udaA-1xdiA:
undetectable		 4udaA-1xdiA:
17.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XE3_A_CL6A502_1
(CYTOCHROME P-450)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 5 LEU A   8
ALA A 314
THR A 307
VAL A 289
ILE A 291
 FAD  A 999 ( 4.8A)
None
None
None
None
 1.10A 4xe3A-1xdiA:
undetectable		 4xe3A-1xdiA:
24.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XE3_B_CL6B502_1
(CYTOCHROME P-450)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 5 LEU A   8
THR A 307
VAL A 289
ILE A 291
 FAD  A 999 ( 4.8A)
None
None
None
 0.91A 4xe3B-1xdiA:
undetectable		 4xe3B-1xdiA:
24.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZJZ_A_BEZA1001_0
(BENZOATE-COENZYME A
LIGASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		4 / 8 GLY A  14
ALA A  13
GLY A 332
MET A 336
 None
FAD  A 999 (-3.5A)
None
None
 0.65A 4zjzA-1xdiA:
undetectable		 4zjzA-1xdiA:
23.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5D0Y_A_FOLA201_1
(CONSERVED
HYPOTHETICAL
MEMBRANE PROTEIN)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		3 / 3 ARG A 288
LYS A 132
GLU A 118
 None
 0.72A 5d0yA-1xdiA:
undetectable		 5d0yA-1xdiA:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NUK_A_Z80A201_1
(BETA-LACTOGLOBULIN)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 10 ALA A 431
VAL A 434
PHE A 405
ILE A 404
ALA A 353
 None
 1.08A 5nukA-1xdiA:
undetectable		 5nukA-1xdiA:
11.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TIW_B_OAQB302_0
(SULFOTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 ASP A 121
LEU A 119
VAL A 148
ILE A   5
THR A   3
 None
 1.24A 5tiwB-1xdiA:
undetectable		 5tiwB-1xdiA:
18.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_A_C2FA3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A 153
VAL A 112
LEU A 105
GLY A  38
ARG A 173
 FAD  A 999 (-3.3A)
None
None
None
None
 1.19A 5vooA-1xdiA:
undetectable		 5vooA-1xdiA:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_C_C2FC702_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A 153
VAL A 112
LEU A 105
GLY A  38
ARG A 173
 FAD  A 999 (-3.3A)
None
None
None
None
 1.16A 5vooC-1xdiA:
undetectable		 5vooC-1xdiA:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_E_C2FE3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A 153
VAL A 112
LEU A 105
GLY A  38
ARG A 173
 FAD  A 999 (-3.3A)
None
None
None
None
 1.10A 5vooE-1xdiA:
undetectable		 5vooE-1xdiA:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOP_B_C2FB3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 GLY A 153
VAL A 112
LEU A 105
GLY A  38
ARG A 173
 FAD  A 999 (-3.3A)
None
None
None
None
 1.13A 5vopB-1xdiA:
undetectable		 5vopB-1xdiA:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A5Z_D_9CRD501_0
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 12 ILE A 457
ALA A 461
ALA A 460
LEU A 443
ALA A 444
 None
 1.13A 6a5zD-1xdiA:
undetectable		 6a5zD-1xdiA:
11.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BM5_A_SAMA1301_0
(METHIONINE SYNTHASE)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 11 ASP A  46
ARG A 173
ALA A  13
ALA A  18
TYR A  15
 None
None
FAD  A 999 (-3.5A)
None
None
 1.25A 6bm5A-1xdiA:
0.0		 6bm5A-1xdiA:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CZM_C_HISC402_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE CATALYTIC
SUBUNIT)		 1xdi RV3303C-LPDA
(Mycobacterium
tuberculosis) 		5 / 9 GLY A 294
LEU A 293
GLN A 292
THR A 307
VAL A 301
 None
 1.22A 6czmB-1xdiA:
undetectable
6czmC-1xdiA:
undetectable		 6czmB-1xdiA:
21.50
6czmC-1xdiA:
21.50