SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yab'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XQE_A_AG2A506_1
(HOMOSPERMIDINE
SYNTHASE)		 1yab CHEMOTAXIS PROTEIN
(Thermotoga
maritima) 		4 / 6 ARG A 125
ARG A  87
ASP A 115
ASP A 107
 None
 1.40A 4xqeA-1yabA:
undetectable		 4xqeA-1yabA:
12.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDQ_F_MFXF2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)		 1yab CHEMOTAXIS PROTEIN
(Thermotoga
maritima) 		4 / 6 ASP A 115
ARG A 125
GLY A 126
GLU A 141
 None
 1.02A 5cdqA-1yabA:
undetectable
5cdqC-1yabA:
undetectable
5cdqD-1yabA:
undetectable		 5cdqA-1yabA:
13.15
5cdqC-1yabA:
13.15
5cdqD-1yabA:
21.74