SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yd6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_A_P1ZA1352_1
(PROSTAGLANDIN
REDUCTASE 2)		 1yd6 UVRC
([Bacillus]
caldotenax) 		4 / 7 TYR A  89
TYR A  44
LEU A  93
TYR A  19
 None
 1.40A 2w98A-1yd6A:
undetectable
2w98B-1yd6A:
undetectable		 2w98A-1yd6A:
13.80
2w98B-1yd6A:
13.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RQW_J_ACHJ323_0
(ELIC PENTAMERIC
LIGAND GATED ION
CHANNEL FROM ERWINIA
CHRYSANTHEMI)		 1yd6 UVRC
([Bacillus]
caldotenax) 		4 / 8 GLU A  58
GLU A  59
TYR A  89
LEU A  93
 None
 1.09A 3rqwF-1yd6A:
undetectable
3rqwJ-1yd6A:
undetectable		 3rqwF-1yd6A:
12.96
3rqwJ-1yd6A:
12.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z4C_A_IPHA904_0
(PROTEIN ARGONAUTE-2)		 1yd6 UVRC
([Bacillus]
caldotenax) 		4 / 6 LYS A  88
PRO A  87
LEU A  56
GLU A  59
 None
 1.30A 4z4cA-1yd6A:
undetectable		 4z4cA-1yd6A:
7.47