SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ydm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AEG_A_4APA296_1
(CYTOCHROME C
PEROXIDASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 8 GLY A 137
GLY A 134
LEU A 167
ASP A 170
 SO4  A 301 (-3.8A)
SO4  A 301 (-3.3A)
None
None
 0.85A 1aegA-1ydmA:
undetectable		 1aegA-1ydmA:
20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A35_A_RBFA191_1
(LUMAZINE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		5 / 12 VAL A 173
SER A 153
THR A 151
THR A  56
ILE A  54
 None
 1.21A 3a35A-1ydmA:
undetectable		 3a35A-1ydmA:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A3B_A_RBFA191_1
(LUMAZINE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		5 / 12 VAL A 173
SER A 153
THR A 151
THR A  56
ILE A  54
 None
 1.21A 3a3bA-1ydmA:
undetectable		 3a3bA-1ydmA:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DDY_A_RBFA187_1
(LUMAZINE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		5 / 12 VAL A 173
SER A 153
THR A 151
THR A  56
ILE A  54
 None
 1.19A 3ddyA-1ydmA:
undetectable		 3ddyA-1ydmA:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DEU_A_SALA301_1
(TRANSCRIPTIONAL
REGULATOR SLYA)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 6 ARG A 132
ILE A 171
VAL A 173
HIS A 174
 SO4  A 301 (-2.6A)
None
None
None
 1.33A 3deuA-1ydmA:
undetectable		 3deuA-1ydmA:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DEU_B_SALB302_1
(TRANSCRIPTIONAL
REGULATOR SLYA)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 5 ARG A 132
ILE A 171
VAL A 173
HIS A 174
 SO4  A 301 (-2.6A)
None
None
None
 1.28A 3deuB-1ydmA:
undetectable		 3deuB-1ydmA:
19.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UJ6_A_SAMA300_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		5 / 12 LEU A  35
ILE A 120
ILE A 182
ILE A 183
ARG A 132
 None
None
None
None
SO4  A 301 (-2.6A)
 1.04A 3uj6A-1ydmA:
undetectable		 3uj6A-1ydmA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UJ7_A_SAMA301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		5 / 12 LEU A  35
ILE A 120
ILE A 182
ILE A 183
ARG A 132
 None
None
None
None
SO4  A 301 (-2.6A)
 1.03A 3uj7A-1ydmA:
2.3		 3uj7A-1ydmA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JKU_B_ADNB500_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4jkuB-1ydmA:
2.8		 4jkuB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K8C_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.64A 4k8cA-1ydmA:
3.1		 4k8cA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K8P_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.39A 4k8pA-1ydmA:
2.8		 4k8pA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K8P_B_ADNB401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k8pB-1ydmA:
2.8		 4k8pB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K8T_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k8tA-1ydmA:
2.8		 4k8tA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K8T_B_ADNB401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.39A 4k8tB-1ydmA:
2.8		 4k8tB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K93_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.39A 4k93A-1ydmA:
3.2		 4k93A-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K93_B_ADNB402_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.41A 4k93B-1ydmA:
2.8		 4k93B-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K9C_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k9cA-1ydmA:
2.8		 4k9cA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K9C_B_ADNB401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k9cB-1ydmA:
2.8		 4k9cB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K9I_A_ADNA401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k9iA-1ydmA:
2.8		 4k9iA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K9I_B_ADNB401_2
(SUGAR KINASE)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4k9iB-1ydmA:
2.8		 4k9iB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAD_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.39A 4kadA-1ydmA:
3.1		 4kadA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAD_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4kadB-1ydmA:
3.1		 4kadB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAH_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.65A 4kahA-1ydmA:
3.1		 4kahA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAH_B_ADNB502_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.64A 4kahB-1ydmA:
2.8		 4kahB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAN_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.65A 4kanA-1ydmA:
3.1		 4kanA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KAN_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.64A 4kanB-1ydmA:
2.8		 4kanB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KBE_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.65A 4kbeA-1ydmA:
3.1		 4kbeA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KBE_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.67A 4kbeB-1ydmA:
3.1		 4kbeB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LBG_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.61A 4lbgA-1ydmA:
2.8		 4lbgA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LBG_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		3 / 3 SER A  49
TYR A  97
PRO A 122
 None
 0.64A 4lbgB-1ydmA:
2.8		 4lbgB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LBX_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.41A 4lbxA-1ydmA:
2.8		 4lbxA-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LBX_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.41A 4lbxB-1ydmA:
2.8		 4lbxB-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LC4_A_ADNA401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.40A 4lc4A-1ydmA:
2.8		 4lc4A-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LC4_B_ADNB401_2
(PROBABLE SUGAR
KINASE PROTEIN)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 4 SER A  49
ILE A 120
TYR A  97
PRO A 122
 None
 1.41A 4lc4B-1ydmA:
2.8		 4lc4B-1ydmA:
18.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJC_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)		 1ydm HYPOTHETICAL PROTEIN
YQGN
(Bacillus
subtilis) 		4 / 7 LEU A 144
ILE A  72
THR A  47
MET A  82
 None
 1.22A 5ljcA-1ydmA:
undetectable		 5ljcA-1ydmA:
22.47