SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yew'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
11GS_A_EAAA211_1
(GLUTATHIONE
S-TRANSFERASE)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
4 / 7 TYR C 146
PHE B  31
VAL B  34
GLY B  95
None
0.93A 11gsA-1yewC:
undetectable
11gsA-1yewC:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AV2_D_DVAD8_0
(GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 VAL B  91
VAL A 200
TRP B  87
None
0.82A 1av2C-1yewB:
undetectable
1av2D-1yewB:
undetectable
1av2C-1yewB:
16.05
1av2D-1yewB:
16.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_A_DVAA8_0
(GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
3 / 4 VAL B  61
TRP B 152
TRP B  60
None
1.15A 1gmkA-1yewB:
undetectable
1gmkB-1yewB:
undetectable
1gmkA-1yewB:
16.05
1gmkB-1yewB:
16.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_B_DVAB6_0
(GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
4 / 4 VAL C 139
TRP C 137
ALA C 191
VAL C 136
None
1.38A 1gmkA-1yewC:
undetectable
1gmkB-1yewC:
undetectable
1gmkA-1yewC:
5.63
1gmkB-1yewC:
5.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_C_DVAC8_0
(GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
3 / 4 VAL B  61
TRP B 152
TRP B  60
None
1.21A 1gmkC-1yewB:
undetectable
1gmkD-1yewB:
undetectable
1gmkC-1yewB:
16.05
1gmkD-1yewB:
16.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_D_DVAD8_0
(GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 TRP A 206
VAL A 200
TRP B  87
None
1.26A 1gmkC-1yewA:
undetectable
1gmkD-1yewA:
undetectable
1gmkC-1yewA:
3.53
1gmkD-1yewA:
3.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1W5U_D_DVAD8_0
(GRAMICIDIN D)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 VAL B  91
VAL A 200
TRP B  87
None
0.72A 1w5uC-1yewB:
undetectable
1w5uD-1yewB:
undetectable
1w5uC-1yewB:
16.05
1w5uD-1yewB:
16.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YC5_A_NCAA2001_0
(NAD-DEPENDENT
DEACETYLASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
4 / 7 ALA B 122
ASP B  49
ASN B 160
ILE B 164
None
0.99A 1yc5A-1yewB:
undetectable
1yc5A-1yewB:
20.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2IZQ_A_DVAA8_0
(GRAMICIDIN D)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 VAL A 200
TRP B  87
VAL B  91
None
0.68A 2izqA-1yewA:
undetectable
2izqB-1yewA:
undetectable
2izqA-1yewA:
3.53
2izqB-1yewA:
3.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_C_KLNC1498_1
(CYTOCHROME P450 3A4)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
5 / 12 PHE C  92
ILE C 145
ALA C 149
THR C 153
GLU C 100
None
1.24A 2v0mC-1yewC:
undetectable
2v0mC-1yewC:
20.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VXA_G_RBFG200_1
(DODECIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 8 HIS A 139
TYR A 336
TRP A  54
THR A 334
CUA  A   3 (-3.1A)
None
None
None
1.50A 2vxaF-1yewA:
undetectable
2vxaG-1yewA:
undetectable
2vxaI-1yewA:
undetectable
2vxaF-1yewA:
10.21
2vxaG-1yewA:
10.21
2vxaI-1yewA:
10.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_A_P1ZA1352_1
(PROSTAGLANDIN
REDUCTASE 2)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 7 TYR B 188
TYR B 173
LEU A 180
ASN B 117
None
1.42A 2w98A-1yewB:
undetectable
2w98B-1yewB:
undetectable
2w98A-1yewB:
21.72
2w98B-1yewB:
21.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XKK_E_MFXE1100_1
(TOPOISOMERASE IV
DNA)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 ARG A 125
GLU A  63
SER A 103
None
0.89A 2xkkA-1yewA:
undetectable
2xkkC-1yewA:
undetectable
2xkkA-1yewA:
17.96
2xkkC-1yewA:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XZ5_A_ACHA1211_0
(SOLUBLE
ACETYLCHOLINE
RECEPTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 7 SER C  80
GLN A  38
ILE C 163
SER A  37
None
1.30A 2xz5A-1yewC:
undetectable
2xz5B-1yewC:
undetectable
2xz5A-1yewC:
21.12
2xz5B-1yewC:
21.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y7H_B_SAMB530_1
(TYPE I RESTRICTION
ENZYME ECOKI M
PROTEIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 TYR C 151
GLU C  69
THR B 112
None
0.69A 2y7hB-1yewC:
undetectable
2y7hB-1yewC:
19.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z77_D_NCAD200_0
(PUTATIVE STEROID
ISOMERASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 9 ASP B  49
LEU B  97
LEU B  68
LEU B 124
MET B  45
None
1.46A 2z77D-1yewB:
0.0
2z77D-1yewB:
20.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJ8_C_SPMC500_1
(DIAMINE
ACETYLTRANSFERASE 1)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
4 / 6 LEU C 107
LEU C 138
HIS C 134
TRP C 108
None
1.25A 3bj8C-1yewC:
undetectable
3bj8D-1yewC:
undetectable
3bj8C-1yewC:
19.24
3bj8D-1yewC:
19.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GAN_A_SVRA158_1
(UNCHARACTERIZED
PROTEIN AT3G22680)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 GLN A 108
VAL A 110
PRO A 111
TYR A  50
PRO A  84
None
1.14A 3ganA-1yewA:
undetectable
3ganA-1yewA:
16.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GWX_A_EPAA1_1
(PROTEIN (PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
(PPAR-DELTA)))
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 10 VAL B 169
GLN A 265
LEU A 180
VAL A 170
VAL A 178
None
1.07A 3gwxA-1yewB:
undetectable
3gwxA-1yewB:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_A_SAMA301_0
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
5 / 12 TRP A 136
GLY A  95
THR C 162
PHE A  98
ILE A  99
None
1.31A 3iv6A-1yewA:
undetectable
3iv6A-1yewA:
22.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_E_TFPE202_1
(PROTEIN S100-A4)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 LEU B 167
SER B 179
ILE B 164
PHE B 243
ASP B  56
None
1.38A 3ko0C-1yewB:
1.2
3ko0D-1yewB:
1.1
3ko0E-1yewB:
1.1
3ko0F-1yewB:
1.3
3ko0C-1yewB:
16.80
3ko0D-1yewB:
16.80
3ko0E-1yewB:
16.80
3ko0F-1yewB:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_T_TFPT202_1
(PROTEIN S100-A4)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 ASP B  56
LEU B 167
SER B 179
ILE B 164
PHE B 243
None
1.30A 3ko0Q-1yewB:
1.3
3ko0R-1yewB:
1.3
3ko0S-1yewB:
1.3
3ko0T-1yewB:
1.3
3ko0Q-1yewB:
16.80
3ko0R-1yewB:
16.80
3ko0S-1yewB:
16.80
3ko0T-1yewB:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_D_DVAD8_0
(GRAMICIDIN D)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 VAL B  63
VAL B  61
TRP B  48
None
0.96A 3l8lC-1yewB:
undetectable
3l8lD-1yewB:
undetectable
3l8lC-1yewB:
16.05
3l8lD-1yewB:
16.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3L8L_D_DVAD8_0
(GRAMICIDIN D)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 VAL B  91
VAL A 200
TRP B  87
None
0.61A 3l8lC-1yewB:
undetectable
3l8lD-1yewB:
undetectable
3l8lC-1yewB:
16.05
3l8lD-1yewB:
16.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NV6_A_CAMA422_0
(CYTOCHROME P450)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 GLY B 127
ILE A 246
VAL A 247
None
0.52A 3nv6A-1yewB:
undetectable
3nv6A-1yewB:
19.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OEZ_A_STIA601_2
(PROTO-ONCOGENE
TYROSINE-PROTEIN
KINASE SRC)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 5 VAL A  81
ILE A 118
MET A 272
ARG A  43
None
1.03A 3oezA-1yewA:
0.0
3oezA-1yewA:
23.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PYY_B_STIB4_2
(V-ABL ABELSON MURINE
LEUKEMIA VIRAL
ONCOGENE HOMOLOG 1
ISOFORM B VARIANT)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 5 VAL A  81
ILE A 118
MET A 272
ARG A  43
None
1.00A 3pyyB-1yewA:
undetectable
3pyyB-1yewA:
21.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_A_FUNA201_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 PRO B 170
SER B 179
ILE B 180
VAL A 170
VAL A 178
None
1.32A 3rf4A-1yewB:
undetectable
3rf4C-1yewB:
undetectable
3rf4A-1yewB:
20.16
3rf4C-1yewB:
20.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_B_FUNB202_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 PRO B 170
SER B 179
ILE B 180
VAL A 170
VAL A 178
None
1.32A 3rf4A-1yewB:
undetectable
3rf4B-1yewB:
undetectable
3rf4A-1yewB:
20.16
3rf4B-1yewB:
20.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RF4_C_FUNC203_1
(MACROPHAGE MIGRATION
INHIBITORY FACTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 PRO B 170
SER B 179
ILE B 180
VAL A 170
VAL A 178
None
1.28A 3rf4B-1yewB:
undetectable
3rf4C-1yewB:
undetectable
3rf4B-1yewB:
20.16
3rf4C-1yewB:
20.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S56_A_ROCA201_1
(PROTEASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 12 GLY B 148
ASP B 132
ILE B 129
THR A 243
ILE A 244
None
1.07A 3s56A-1yewB:
undetectable
3s56A-1yewB:
16.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_C_ACTC502_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 PRO A  84
ASP A  85
GLU A 117
None
0.79A 3v4tC-1yewA:
undetectable
3v4tC-1yewA:
23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_A_DVAA8_0
(VAL-GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
3 / 3 VAL A 200
TRP A 206
TRP B  87
None
1.38A 3zq8A-1yewA:
undetectable
3zq8B-1yewA:
undetectable
3zq8A-1yewA:
3.53
3zq8B-1yewA:
3.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ZQ8_B_DVAB8_0
(VAL-GRAMICIDIN A)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 TRP A 202
VAL A 200
TRP A 206
None
1.18A 3zq8A-1yewA:
undetectable
3zq8B-1yewA:
undetectable
3zq8A-1yewA:
3.53
3zq8B-1yewA:
3.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ACA_B_DXCB1473_0
(TRANSLATION
ELONGATION FACTOR
SELB)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 9 ILE B 129
GLY B 127
THR B  90
GLN B  76
GLY B  88
None
1.23A 4acaB-1yewB:
undetectable
4acaC-1yewB:
undetectable
4acaB-1yewB:
19.18
4acaC-1yewB:
19.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GC9_A_SAMA401_0
(DIMETHYLADENOSINE
TRANSFERASE 1,
MITOCHONDRIAL)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
5 / 12 GLY B 151
GLY B 127
PRO B 126
ILE A 244
LEU B 154
None
1.04A 4gc9A-1yewB:
undetectable
4gc9A-1yewB:
19.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L1A_A_AB1A101_1
(MDR769 HIV-1
PROTEASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 11 ARG B  84
GLY B  88
ALA B  89
ILE B 227
THR B 144
None
1.02A 4l1aA-1yewB:
undetectable
4l1aA-1yewB:
18.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L1A_A_AB1A101_2
(MDR769 HIV-1
PROTEASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 6 ASN A 143
GLY A  34
PRO B 194
THR B 193
None
0.86A 4l1aB-1yewA:
undetectable
4l1aB-1yewA:
13.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MME_B_29QB603_1
(TRANSPORTER)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
5 / 9 ALA C 144
TYR C 146
PHE C 152
SER C 150
GLY C 148
None
1.24A 4mmeB-1yewC:
0.7
4mmeB-1yewC:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OLM_A_198A1001_2
(ANDROGEN RECEPTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 6 ASN A 168
ILE B 180
ILE B 183
VAL B 171
None
0.95A 4olmA-1yewA:
undetectable
4olmA-1yewA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QTU_D_SAMD301_0
(PUTATIVE
METHYLTRANSFERASE
BUD23)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
5 / 12 TYR C 141
GLY C 148
ILE B  39
SER B  36
ILE C 183
None
1.17A 4qtuD-1yewC:
undetectable
4qtuD-1yewC:
18.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UCK_A_SAMA2409_1
(RNA-DIRECTED RNA
POLYMERASE L)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 SER A 412
ASP A 406
ASP A 288
None
0.68A 4uckA-1yewA:
undetectable
4uckA-1yewA:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4USW_A_ACTA1470_0
(ADENYLATE CYCLASE
TYPE 10)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 6 LEU A 376
LEU A 340
VAL A 322
ARG A  43
None
1.10A 4uswA-1yewA:
undetectable
4uswA-1yewA:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ALB_L_TIQL1210_2
(MEDI2452 LIGHT CHAIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 8 SER A 207
GLY A 204
ALA B 128
GLY A 199
None
0.84A 5albL-1yewA:
3.5
5albL-1yewA:
18.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JCN_B_ASCB502_0
(OS09G0567300 PROTEIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 6 GLU A  79
PRO A  78
PHE A  41
ARG A 386
None
1.49A 5jcnB-1yewA:
undetectable
5jcnB-1yewA:
22.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N9X_A_THRA601_0
(ADENYLATION DOMAIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 7 PHE B 219
GLY C 252
GLY C 247
HIS C 245
None
0.89A 5n9xA-1yewB:
undetectable
5n9xA-1yewB:
19.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_A_CUA601_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 HIS C 173
ASP C 156
HIS C 160
ZN  C 661 (-3.4A)
ZN  C 661 (-2.3A)
ZN  C 661 (-2.9A)
0.78A 5oexA-1yewC:
undetectable
5oexA-1yewC:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_A_CUA602_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 LYS A  33
HIS A 139
HIS A  33
CUA  A   3 (-3.9A)
CUA  A   3 (-3.1A)
CUA  A   3 (-2.9A)
1.19A 5oexA-1yewA:
undetectable
5oexA-1yewA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_B_CUB601_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 HIS C 173
ASP C 156
HIS C 160
ZN  C 661 (-3.4A)
ZN  C 661 (-2.3A)
ZN  C 661 (-2.9A)
0.76A 5oexB-1yewC:
undetectable
5oexB-1yewC:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_B_CUB602_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 LYS A  33
HIS A 139
HIS A  33
CUA  A   3 (-3.9A)
CUA  A   3 (-3.1A)
CUA  A   3 (-2.9A)
1.13A 5oexB-1yewA:
undetectable
5oexB-1yewA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_C_CUC601_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 HIS C 173
ASP C 156
HIS C 160
ZN  C 661 (-3.4A)
ZN  C 661 (-2.3A)
ZN  C 661 (-2.9A)
0.73A 5oexC-1yewC:
undetectable
5oexC-1yewC:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_C_CUC603_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 LYS A  33
HIS A 139
HIS A  33
CUA  A   3 (-3.9A)
CUA  A   3 (-3.1A)
CUA  A   3 (-2.9A)
1.12A 5oexC-1yewA:
undetectable
5oexC-1yewA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_D_CUD601_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 HIS C 173
ASP C 156
HIS C 160
ZN  C 661 (-3.4A)
ZN  C 661 (-2.3A)
ZN  C 661 (-2.9A)
0.73A 5oexD-1yewC:
undetectable
5oexD-1yewC:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OEX_D_CUD603_0
(THIOCYANATE
DEHYDROGENASE)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 LYS A  33
HIS A 139
HIS A  33
CUA  A   3 (-3.9A)
CUA  A   3 (-3.1A)
CUA  A   3 (-2.9A)
1.16A 5oexD-1yewA:
undetectable
5oexD-1yewA:
22.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UC1_A_486A801_2
(GLUCOCORTICOID
RECEPTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 TRP C  89
MET C  90
ASN C  91
None
1.37A 5uc1B-1yewC:
undetectable
5uc1B-1yewC:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UC1_B_486B801_1
(GLUCOCORTICOID
RECEPTOR)
1yew PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus)
3 / 3 TRP C  89
MET C  90
ASN C  91
None
1.32A 5uc1A-1yewC:
undetectable
5uc1A-1yewC:
16.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VEU_A_RITA602_2
(CYTOCHROME P450 3A5)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
3 / 3 ARG A  45
PHE A  71
LEU A 390
None
0.86A 5veuA-1yewA:
undetectable
5veuA-1yewA:
21.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_A_PCFA1804_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 5 THR B 112
ASN B 107
TRP C 159
LEU C  78
None
1.33A 5vkqA-1yewB:
2.2
5vkqB-1yewB:
1.6
5vkqA-1yewB:
9.15
5vkqB-1yewB:
9.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_B_PCFB1801_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 5 THR B 112
ASN B 107
TRP C 159
LEU C  78
None
1.34A 5vkqB-1yewB:
1.6
5vkqC-1yewB:
1.5
5vkqB-1yewB:
9.15
5vkqC-1yewB:
9.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_C_PCFC1802_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 5 THR B 112
ASN B 107
TRP C 159
LEU C  78
None
1.34A 5vkqC-1yewB:
1.6
5vkqD-1yewB:
2.1
5vkqC-1yewB:
9.15
5vkqD-1yewB:
9.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VYH_A_FOLA409_0
(S PROTEIN)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT

(Methylococcus
capsulatus)
5 / 10 HIS B  40
GLY B 148
THR B 144
ILE B 130
ALA B  89
None
1.33A 5vyhA-1yewB:
undetectable
5vyhA-1yewB:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y2T_A_8LXA501_0
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
5 / 12 LEU A 376
GLY A 389
GLN A 404
LEU A 302
MET A 298
None
None
CU  A   4 (-3.6A)
None
None
0.97A 5y2tA-1yewA:
undetectable
5y2tA-1yewA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DJZ_B_GMJB301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
5 / 12 SER C 172
ILE C 163
PHE C  85
TRP C  89
THR B 112
None
1.30A 6djzB-1yewC:
undetectable
6djzB-1yewC:
22.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DRX_A_H8GA1201_0
(5HT2B RECEPTOR, BRIL
CHIMERA)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
5 / 12 TRP B 111
VAL C  65
PHE C  92
TRP C 147
TYR C 151
None
1.43A 6drxA-1yewB:
undetectable
6drxA-1yewB:
19.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6G2P_A_TRPA502_0
(FLAVIN-DEPENDENT
L-TRYPTOPHAN OXIDASE
VIOA)
1yew PARTICULATE METHANE
MONOOXYGENASE, A
SUBUNIT
PARTICULATE METHANE
MONOOXYGENASE
SUBUNIT C2

(Methylococcus
capsulatus;
Methylococcus
capsulatus)
4 / 7 TYR B  83
LEU B  26
TYR C 246
VAL B  29
None
1.16A 6g2pA-1yewB:
undetectable
6g2pA-1yewB:
18.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6HD6_B_STIB601_1
(TYROSINE-PROTEIN
KINASE ABL1)
1yew PARTICULATE METHANE
MONOOXYGENASE, B
SUBUNIT

(Methylococcus
capsulatus)
4 / 7 VAL A  81
ILE A 118
GLY A 106
ARG A  43
None
0.85A 6hd6B-1yewA:
undetectable
6hd6B-1yewA:
13.83