SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yjm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_A_SAMA301_1
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)		 1yjm POLYNUCLEOTIDE
5'-HYDROXYL-KINASE
(Mus
musculus) 		3 / 3 SER A  86
ASP A  91
ASP A  56
 None
 0.78A 3iv6A-1yjmA:
undetectable		 3iv6A-1yjmA:
24.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IV6_C_SAMC301_1
(PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE)		 1yjm POLYNUCLEOTIDE
5'-HYDROXYL-KINASE
(Mus
musculus) 		3 / 3 SER A  86
ASP A  91
ASP A  56
 None
 0.77A 3iv6C-1yjmA:
undetectable		 3iv6C-1yjmA:
24.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X20_D_LOCD502_1
(TUBULIN ALPHA CHAIN
TUBULIN BETA CHAIN)		 1yjm POLYNUCLEOTIDE
5'-HYDROXYL-KINASE
(Mus
musculus) 		3 / 3 SER A  84
ALA A  63
VAL A  62
 None
 0.55A 4x20C-1yjmA:
undetectable		 4x20C-1yjmA:
12.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DLZ_D_CYZD1302_0
(GLUTAMATE RECEPTOR
2,VOLTAGE-DEPENDENT
CALCIUM CHANNEL
GAMMA-2 SUBUNIT)		 1yjm POLYNUCLEOTIDE
5'-HYDROXYL-KINASE
(Mus
musculus) 		5 / 11 ILE A  54
PRO A  57
SER A  59
LEU A 104
ASP A  91
 None
 1.40A 6dlzA-1yjmA:
undetectable
6dlzD-1yjmA:
undetectable		 6dlzA-1yjmA:
19.30
6dlzD-1yjmA:
19.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DM1_D_CYZD1302_0
(GLUTAMATE RECEPTOR
2,VOLTAGE-DEPENDENT
CALCIUM CHANNEL
GAMMA-2 SUBUNIT)		 1yjm POLYNUCLEOTIDE
5'-HYDROXYL-KINASE
(Mus
musculus) 		5 / 11 ILE A  54
PRO A  57
SER A  59
LEU A 104
ASP A  91
 None
 1.40A 6dm1A-1yjmA:
undetectable
6dm1D-1yjmA:
undetectable		 6dm1A-1yjmA:
19.30
6dm1D-1yjmA:
19.30