SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yk4'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PYM_A_1UNA1001_3
(PROTEASE RETROPEPSIN)		 1yk4 RUBREDOXIN
(Pyrococcus
abyssi) 		3 / 3 ASP A  21
ASN A  22
THR A  28
 None
 0.76A 2pymB-1yk4A:
undetectable		 2pymB-1yk4A:
17.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X23_A_LSNA503_1
(CYTOCHROME P450 2C9)		 1yk4 RUBREDOXIN
(Pyrococcus
abyssi) 		4 / 5 PRO A  26
GLY A  27
THR A  28
LYS A  29
 None
 0.99A 5x23A-1yk4A:
undetectable		 5x23A-1yk4A:
10.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X24_A_LSNA503_1
(CYTOCHROME P450 2C9)		 1yk4 RUBREDOXIN
(Pyrococcus
abyssi) 		4 / 6 PRO A  26
GLY A  27
THR A  28
LYS A  29
 None
 0.96A 5x24A-1yk4A:
undetectable		 5x24A-1yk4A:
10.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XXI_A_LSNA502_1
(CYTOCHROME P450 2C9)		 1yk4 RUBREDOXIN
(Pyrococcus
abyssi) 		4 / 6 PRO A  26
GLY A  27
THR A  28
LYS A  29
 None
 0.93A 5xxiA-1yk4A:
undetectable		 5xxiA-1yk4A:
9.97