SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1ykg'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BU5_A_RBFA301_1
(PROTEIN (FLAVODOXIN))		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		6 / 7 THR A  71
ASN A  73
THR A 117
GLY A 153
ASP A 154
TYR A 157
 FMN  A 300 (-3.2A)
FMN  A 300 (-3.2A)
FMN  A 300 (-4.0A)
FMN  A 300 (-2.5A)
FMN  A 300 (-4.9A)
FMN  A 300 (-3.4A)
 0.84A 1bu5A-1ykgA:
20.3		 1bu5A-1ykgA:
29.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BU5_B_RBFB302_1
(PROTEIN (FLAVODOXIN))		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 8 THR A  71
ASN A  73
THR A 117
TYR A 157
 FMN  A 300 (-3.2A)
FMN  A 300 (-3.2A)
FMN  A 300 (-4.0A)
FMN  A 300 (-3.4A)
 0.53A 1bu5B-1ykgA:
20.4		 1bu5B-1ykgA:
29.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BU5_B_RBFB302_1
(PROTEIN (FLAVODOXIN))		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 8 THR A  71
THR A 117
GLY A 153
ASP A 154
TYR A 157
 FMN  A 300 (-3.2A)
FMN  A 300 (-4.0A)
FMN  A 300 (-2.5A)
FMN  A 300 (-4.9A)
FMN  A 300 (-3.4A)
 0.78A 1bu5B-1ykgA:
20.4		 1bu5B-1ykgA:
29.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C6Z_B_ROCB505_1
(PROTEIN (PROTEASE))		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 12 GLY A  98
ALA A  97
VAL A 113
THR A  64
ILE A  66
 None
 0.92A 1c6zA-1ykgA:
undetectable		 1c6zA-1ykgA:
16.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C6Z_B_ROCB505_2
(PROTEIN (PROTEASE))		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 12 GLY A  98
ALA A  97
VAL A 113
THR A  64
ILE A  66
 None
 0.95A 1c6zB-1ykgA:
undetectable		 1c6zB-1ykgA:
16.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2C6N_B_LPRB705_2
(ANGIOTENSIN-CONVERTI
NG ENZYME, SOMATIC
ISOFORM)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		3 / 3 ALA A 127
THR A 115
PHE A 102
 None
 0.75A 2c6nB-1ykgA:
undetectable		 2c6nB-1ykgA:
15.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJF_A_ADNA2001_1
(235AA LONG
HYPOTHETICAL
BIOTIN--[ACETYL-COA-
CARBOXYLASE] LIGASE)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 7 ARG A  75
ALA A  97
PRO A 124
ALA A 127
 None
 0.96A 2ejfA-1ykgA:
undetectable		 2ejfA-1ykgA:
21.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F78_B_BEZB1004_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 7 VAL A 149
SER A 151
LEU A 171
HIS A 131
 None
 1.03A 2f78B-1ykgA:
undetectable		 2f78B-1ykgA:
19.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OTH_A_NIMA300_1
(PHOSPHOLIPASE A2
VRV-PL-VIIIA)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 5 LEU A 110
ALA A 203
SER A 206
LYS A 109
 None
 1.15A 2othA-1ykgA:
1.9		 2othA-1ykgA:
18.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MDT_B_VORB506_1
(CHOLESTEROL
24-HYDROXYLASE)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 11 LEU A 134
PHE A 133
SER A 136
ILE A 105
ALA A 106
 None
 1.08A 3mdtB-1ykgA:
undetectable		 3mdtB-1ykgA:
16.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4B3Q_A_NVPA999_1
(REVERSE
TRANSCRIPTASE/RIBONU
CLEASE H)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 7 LEU A 204
LYS A  89
VAL A  92
LEU A  81
 None
 1.15A 4b3qA-1ykgA:
undetectable		 4b3qA-1ykgA:
14.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NJV_A_RITA500_1
(PROTEASE)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 12 GLY A  98
ALA A  97
VAL A 113
THR A  64
ILE A  66
 None
 0.95A 4njvA-1ykgA:
undetectable		 4njvA-1ykgA:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NJV_D_RITD500_2
(PROTEASE)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 12 GLY A  98
ALA A  97
VAL A 113
THR A  64
ILE A  66
 None
 0.94A 4njvD-1ykgA:
undetectable		 4njvD-1ykgA:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ALB_L_TIQL1210_2
(MEDI2452 LIGHT CHAIN)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		4 / 8 SER A 163
GLY A 164
TYR A 189
ALA A 193
 None
 0.86A 5albL-1ykgA:
undetectable		 5albL-1ykgA:
23.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEN_A_VDYA201_1
(CDL2.2)		 1ykg SULFITE REDUCTASE
[NADPH] FLAVOPROTEIN
ALPHA-COMPONENT
(Escherichia
coli) 		5 / 12 LEU A  81
LEU A 171
ILE A 105
ALA A  68
LEU A 130
 None
 1.30A 5ienA-1ykgA:
undetectable		 5ienA-1ykgA:
23.67