SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yq6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)	View	Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1FSL_A_NIOA145_1 (LEGHEMOGLOBIN A)	1yq6	MINOR CAPSID PROTEIN (Salmonella virus PRD1)	4 / 8	ILE A 332 PHE A 225 LEU A 327 VAL A 263	None	0.89A	1fslA-1yq6A: undetectable	1fslA-1yq6A: 26.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1KVL_A_CLSA371_1 (BETA-LACTAMASE)	1yq6	MINOR CAPSID PROTEIN (Salmonella virus PRD1)	5 / 10	GLY A 213 LEU A 320 TYR A 330 THR A 211 GLY A 212	None	1.14A	1kvlA-1yq6A: undetectable	1kvlA-1yq6A: 18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1N4F_A_ASRA141_0 (LYSOZYME C)	1yq6	MINOR CAPSID PROTEIN (Salmonella virus PRD1)	4 / 6	ASN A 322 ASP A 323 GLY A 271 PRO A 289	None	0.95A	1n4fA-1yq6A: undetectable	1n4fA-1yq6A: 21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3KEE_B_30BB500_2 (GENOME POLYPROTEIN)	1yq6	MINOR CAPSID PROTEIN (Salmonella virus PRD1)	3 / 3	PHE A 318 TYR A 279 LEU A 274	None	0.78A	3keeB-1yq6A: undetectable	3keeB-1yq6A: 23.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3PS9_A_SAMA670_1 (TRNA 5-METHYLAMINOMETHYL- 2-THIOURIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN MNMC)	1yq6	MINOR CAPSID PROTEIN (Salmonella virus PRD1)	4 / 6	TYR A 207 GLY A 212 THR A 211 LEU A 231	None	0.97A	3ps9A-1yq6A: undetectable	3ps9A-1yq6A: 12.39

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1FSL_A_NIOA145_1","LEGHEMOGLOBIN A","1yq6","MINOR CAPSID PROTEIN","Salmonella virus PRD1",4,"ILE A 332;PHE A 225;LEU A 327;VAL A 263","None","0.89A","1fslA-1yq6A:undetectable","1fslA-1yq6A:26.59"],["1KVL_A_CLSA371_1","BETA-LACTAMASE","1yq6","MINOR CAPSID PROTEIN","Salmonella virus PRD1",5,"GLY A 213;LEU A 320;TYR A 330;THR A 211;GLY A 212","None","1.14A","1kvlA-1yq6A:undetectable","1kvlA-1yq6A:18.59"],["1N4F_A_ASRA141_0","LYSOZYME C","1yq6","MINOR CAPSID PROTEIN","Salmonella virus PRD1",4,"ASN A 322;ASP A 323;GLY A 271;PRO A 289","None","0.95A","1n4fA-1yq6A:undetectable","1n4fA-1yq6A:21.57"],["3KEE_B_30BB500_2","GENOME POLYPROTEIN","1yq6","MINOR CAPSID PROTEIN","Salmonella virus PRD1",3,"PHE A 318;TYR A 279;LEU A 274","None","0.78A","3keeB-1yq6A:undetectable","3keeB-1yq6A:23.00"],["3PS9_A_SAMA670_1","TRNA 5-METHYLAMINOMETHYL-2-THIOURIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN MNMC","1yq6","MINOR CAPSID PROTEIN","Salmonella virus PRD1",4,"TYR A 207;GLY A 212;THR A 211;LEU A 231","None","0.97A","3ps9A-1yq6A:undetectable","3ps9A-1yq6A:12.39"]]